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SCNpilot_cont_500_bf_scaffold_238

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_238_1
unknown

Not on your lists

comp(99..533)
DNA (435bp) protein (145aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_238_2
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(622..1095)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Segniliparus rugosus ATCC BAA-974 RepID=E5XQ53_9ACTO
NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97405.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter sp. A03.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_238_3
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1056..1418)
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:AHE54687.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
SCNpilot_cont_500_bf_scaffold_238_4
bacterium YEK0313, Bacteria

Not on your lists

comp(1428..2168)
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Xenococcus sp. PCC 7305 RepID=L8MA90_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:CEJ14095.1}; Flags: Precursor;; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
SCNpilot_cont_500_bf_scaffold_238_5
unknown

Not on your lists

2540..3316
DNA (777bp) protein (259aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_238_6
unknown

Not on your lists

3370..3846
DNA (477bp) protein (159aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_238_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4227..5192
DNA (966bp) protein (322aa)
Magnesium and cobalt transport protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LYZ8_RHITR rbh
magnesium and cobalt transport protein rbh
Magnesium and cobalt transport protein {ECO:0000313|EMBL:AGB75330.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_238_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5219..5803)
DNA (585bp) protein (195aa)
Putative transmembrane protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UEH2_9RHIZ
Putative transmembrane protein {ECO:0000313|EMBL:ENN88553.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_238_9
Burkholderia dolosa, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6104..7348)
DNA (1245bp) protein (415aa)
Major facilitator superfamily (MFS_1) transporter n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WG94_9BURK rbh
Major Facilitator Superfamily protein {ECO:0000313|EMBL:AJY10112.1}; TaxID=350701 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia dolosa AU0158.;"
transporter rbh
SCNpilot_cont_500_bf_scaffold_238_10
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7418..8767)
DNA (1350bp) protein (450aa)
amidohydrolase n=1 Tax=Rhizobium mongolense RepID=UPI0003B62A71 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJX37884.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae complex.;" source="Enterobacter cloacae.;"
S-adenosylhomocysteine deaminase rbh
SCNpilot_cont_500_bf_scaffold_238_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8878..9783
DNA (906bp) protein (302aa)
LysR family transcriptional regulator n=1 Tax=Rhizobium mongolense RepID=UPI0003B7775C rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ADH91000.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_238_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9942..11234)
DNA (1293bp) protein (431aa)
Cytosine deaminase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUX9_RHITR rbh
cytosine deaminase rbh
Cytosine deaminase {ECO:0000313|EMBL:AGB74516.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_238_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11250..12191)
DNA (942bp) protein (314aa)
Putative (Deoxy)ribonucleoside ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTG0_RHITR rbh
putative (deoxy)ribonucleoside ABC transporter, permease protein rbh
Putative (Deoxy)ribonucleoside ABC transporter, permease protein {ECO:0000313|EMBL:AGB74517.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_238_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12188..13237)
DNA (1050bp) protein (350aa)
Putative (Deoxy)ribonucleoside ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LTA7_RHITR rbh
putative (deoxy)ribonucleoside ABC transporter, permease protein rbh
Putative (Deoxy)ribonucleoside ABC transporter, permease protein {ECO:0000313|EMBL:AGB74518.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_238_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13227..14753)
DNA (1527bp) protein (509aa)
Putative (Deoxy)ribonucleoside ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWI1_RHITR rbh
putative (deoxy)ribonucleoside ABC transporter, ATP-binding protein rbh
Putative (Deoxy)ribonucleoside ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74519.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_238_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14750..16174)
DNA (1425bp) protein (475aa)
Putative amidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LWJ3_RHITR rbh
putative amidase rbh
Putative amidase {ECO:0000313|EMBL:AGB74520.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_238_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16190..17176)
DNA (987bp) protein (329aa)
Periplasmic protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUY5_RHITR rbh
periplasmic protein rbh
Periplasmic protein {ECO:0000313|EMBL:AGB74521.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_238_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17579..18214)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036716B2
Uncharacterized protein {ECO:0000313|EMBL:AHF88628.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_238_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18363..18998)
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000373B95B
Uncharacterized protein {ECO:0000313|EMBL:EJC63482.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_238_20
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18995..19552)
DNA (558bp) protein (186aa)
RNA polymerase sigma70 n=1 Tax=Rhizobium leguminosarum RepID=UPI000367CF62 rbh
RNA polymerase sigma factor {ECO:0000313|EMBL:KGD96497.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
RNA polymerase ECF-type sigma 70 factor
SCNpilot_cont_500_bf_scaffold_238_21
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19665..20279)
DNA (615bp) protein (205aa)
TetR family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00035E7D10 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:AHF88624.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
TetR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_238_22
RIFOXYA1_FULL_Rhodanobacter_67_6_curated, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20453..21199)
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036418B2 rbh
hypothetical protein
Tax=RIFOXYA1_FULL_Rhodanobacter_67_6_curated
SCNpilot_cont_500_bf_scaffold_238_23
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21407..22105
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036B6F29 rbh
Uncharacterized protein {ECO:0000313|EMBL:ENN86814.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_238_24
Burkholderia phytofirmans, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22294..23004)
DNA (711bp) protein (237aa)
glutathione S-transferase domain; K00799 glutathione S-transferase [EC:2.5.1.18]
Glutathione S-transferase domain n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TCU3_BURPP
Glutathione S-transferase domain {ECO:0000313|EMBL:ACD19517.1}; TaxID=398527 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phytofirmans (strain DSM 17436 / PsJN).;"
SCNpilot_cont_500_bf_scaffold_238_25
Ricinus communis, Ricinus, Malpighiales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(23080..23733)
DNA (654bp) protein (218aa)
Bacterioferritin comigratory protein, putative n=1 Tax=Ricinus communis RepID=B9TFG1_RICCO
bacterioferritin comigratory protein, putative
Bacterioferritin comigratory protein, putative {ECO:0000313|EMBL:EEF25404.1}; TaxID=3988 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Acalyphoideae; Acalypheae; Ricinus.;" source="Ricinus communis (Castor bean).;"
SCNpilot_cont_500_bf_scaffold_238_26
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23846..24265)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037E2654
Putative membrane protein UPF0093 signal peptide {ECO:0000313|EMBL:CCD87653.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_238_27
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24374..24583)
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000374ED20
Uncharacterized protein {ECO:0000313|EMBL:AHF88623.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
SCNpilot_cont_500_bf_scaffold_238_28
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24580..25350)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000364A34E rbh
Uncharacterized protein {ECO:0000313|EMBL:AHF88622.1}; TaxID=754523 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM1689.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_238_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25350..26405)
DNA (1056bp) protein (352aa)
(2Fe-2S)-binding protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037CA7E0 rbh
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:EJC63477.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
Rieske (2Fe-2S) protein rbh
SCNpilot_cont_500_bf_scaffold_238_30
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26444..26605)
DNA (162bp) protein (54aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI0003678D72
Uncharacterized protein {ECO:0000313|EMBL:CDN56765.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Displaying items 1-30 of 141 in total

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