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SCNpilot_cont_500_bf_scaffold_433

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_433_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(296..679)
DNA (384bp) protein (128aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=395492 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM2304).;"
ribonuclease n=1 Tax=Rhizobium mongolense RepID=UPI0003B7309F
PilT protein domain-containing protein; K07062
SCNpilot_cont_500_bf_scaffold_433_2
Rhizobium sp. CCGE 510, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(676..876)
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KPC1_RHISN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJT01487.1}; TaxID=1132836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CCGE 510.;"
SCNpilot_cont_500_bf_scaffold_433_3
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1114..1767)
DNA (654bp) protein (218aa)
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase n=1 Tax=Rhizobium sp. CF080 RepID=J2HZ23_9RHIZ
Alpha/beta hydrolase superfamily enzyme, predicted hydrolase {ECO:0000313|EMBL:CDN53711.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_433_4
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1945..2208)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2DVP5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK87277.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_433_5
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2513..3076)
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036CFD5F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM39396.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_433_6
unknown

Not on your lists

comp(3097..3366)
DNA (270bp) protein (90aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_433_7
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3555..4568)
DNA (1014bp) protein (338aa)
ABC sugar transporter, periplasmic ligand binding protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM2304) RepID=B6A091_RHILW
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_500_bf_scaffold_433_8
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4636..5985)
DNA (1350bp) protein (450aa)
ROK family protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH2_9RHIZ
ROK family protein
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_500_bf_scaffold_433_9
Planktomarina temperata, Planktomarina, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6248..7069
DNA (822bp) protein (274aa)
xylose isomerase; K03335 inosose dehydratase [EC:4.2.1.44]
Xylose isomerase domain-containing protein TIM barrel n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH1_9RHIZ
Xylose isomerase {ECO:0000313|EMBL:AII86759.1}; TaxID=666509 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Planktomarina.;" source="Planktomarina temperata RCA23.;"
SCNpilot_cont_500_bf_scaffold_433_10
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7165..8289
DNA (1125bp) protein (375aa)
Sugar ABC transporter periplasmic protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZH0_9RHIZ
Sugar ABC transporter periplasmic protein {ECO:0000313|EMBL:EHS54163.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
sugar ABC transporter periplasmic protein; K10439 ribose transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_433_11
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8422..9594
DNA (1173bp) protein (391aa)
Oxidoreductase domain protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZG9_9RHIZ
Oxidoreductase domain protein {ECO:0000313|EMBL:EHS54162.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
oxidoreductase domain-containing protein
SCNpilot_cont_500_bf_scaffold_433_12
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9591..11228
DNA (1638bp) protein (546aa)
ABC transporter; K10441 ribose transport system ATP-binding protein [EC:3.6.3.17]
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZG8_9RHIZ
ABC transporter related protein {ECO:0000313|EMBL:EHS54161.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
SCNpilot_cont_500_bf_scaffold_433_13
RHI_Rhodobacterales_62_75, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11191..12147
DNA (957bp) protein (319aa)
monosaccharide-transporting ATPase (EC:3.6.3.17); K10440 ribose transport system permease protein
Monosaccharide-transporting ATPase n=1 Tax=Rhizobium grahamii CCGE 502 RepID=S3HBH8_9RHIZ
Tax=RIFCSPHIGHO2_12_FULL_Rhodobacterales_62_75_curated
SCNpilot_cont_500_bf_scaffold_433_14
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12626..13765)
DNA (1140bp) protein (380aa)
Acyltransferase 3 n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7Y017_MESOW
acyltransferase 3
Acyltransferase 3 {ECO:0000313|EMBL:AEH89307.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_433_15
Vibrio nigripulchritudo, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13837..15282
DNA (1446bp) protein (482aa)
Putative Pectin lyase-like n=1 Tax=Vibrio nigripulchritudo SFn118 RepID=U4GBV6_9VIBR rbh
Putative Pectin lyase-like {ECO:0000313|EMBL:CCN39813.1}; TaxID=1238441 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio nigripulchritudo FTn2.;"
putative Pectin lyase-like rbh
SCNpilot_cont_500_bf_scaffold_433_16
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15474..16223)
DNA (750bp) protein (250aa)
UPI0003CDD07B related cluster n=1 Tax=unknown RepID=UPI0003CDD07B
Acyl-CoA N-acyltransferase {ECO:0000313|EMBL:ESW91326.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_433_17
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16799..17569)
DNA (771bp) protein (257aa)
Putative ABC transporter (Permease protein) n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZ52_BRASO
ABC transporter permease
Putative ABC transporter (Permease protein) {ECO:0000313|EMBL:CAL79178.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_500_bf_scaffold_433_18
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17566..18330)
DNA (765bp) protein (255aa)
Putative ABC transporter (Permease protein) n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5EP29_BRASB
ABC transporter permease {ECO:0000313|EMBL:ETR76541.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
ABC transporter permease
SCNpilot_cont_500_bf_scaffold_433_19
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18327..19106)
DNA (780bp) protein (260aa)
Putative ABC transporter (ATP binding protein) {ECO:0000313|EMBL:CCE01547.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCE01547.1};; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
atsC; ABC transporter ATP-binding protein (EC:3.6.3.-); K01552 [EC:3.6.3.-] rbh
Putative ABC transporter (ATP binding protein) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T520_9BRAD rbh
SCNpilot_cont_500_bf_scaffold_433_20
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19113..19817)
DNA (705bp) protein (235aa)
Putative transcriptional regulatory protein, GntR family n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YZ49_BRASO
GntR family transcriptional regulator
Putative transcriptional regulatory protein, GntR family {ECO:0000313|EMBL:CAL79175.1}; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain ORS278).;"
SCNpilot_cont_500_bf_scaffold_433_21
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19832..20767)
DNA (936bp) protein (312aa)
Putative ABC transporter (Substrate binding protein) n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SRH6_9BRAD rbh
Putative ABC transporter (Substrate binding protein) {ECO:0000313|EMBL:CCD96803.1}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
ABC transporter substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_433_22
Bradyrhizobium sp. ORS 375, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20882..21871
DNA (990bp) protein (330aa)
Putative Fumarylacetoacetate hydrolase family protein {ECO:0000313|EMBL:CCD96804.1}; EC=3.-.-.- {ECO:0000313|EMBL:CCD96804.1};; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;"
fumarylacetoacetate hydrolase family protein (EC:3.-.-.-); K01567 [EC:3.-.-.-]
Putative Fumarylacetoacetate hydrolase family protein n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SRH7_9BRAD
SCNpilot_cont_500_bf_scaffold_433_23
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21904..22680
DNA (777bp) protein (259aa)
Cyclase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JI03_AGRRK rbh
cyclase rbh
Cyclase {ECO:0000313|EMBL:KEA08134.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;"
SCNpilot_cont_500_bf_scaffold_433_24
Mesorhizobium opportunistum, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22873..23682
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075) RepID=F7YEM4_MESOW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEH86829.1}; TaxID=536019 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium opportunistum (strain LMG 24607 / HAMBI 3007 / WSM2075).;"
SCNpilot_cont_500_bf_scaffold_433_25
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23764..25059)
DNA (1296bp) protein (432aa)
Major facilitator superfamily protein MFS_1 n=1 Tax=Mycobacterium smegmatis MKD8 RepID=L8FAK6_MYCSM
Major facilitator superfamily protein MFS_1 {ECO:0000313|EMBL:ELQ88374.1}; TaxID=1214915 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis MKD8.;"
major facilitator superfamily protein
SCNpilot_cont_500_bf_scaffold_433_26
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25148..26035)
DNA (888bp) protein (296aa)
Glyoxalase/bleomycin resistance protein/dioxygenase protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JMM0_AGRRK
Glyoxalase/bleomycin resistance protein/dioxygenase protein
Glyoxalase/bleomycin resistance protein/dioxygenase protein {ECO:0000313|EMBL:ACM28801.1}; TaxID=311403 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter (strain K84 / ATCC BAA-868).;"
SCNpilot_cont_500_bf_scaffold_433_27
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26076..26960)
DNA (885bp) protein (295aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10)
5-carboxymethyl-2-hydroxymuconate delta-isomerase {ECO:0000313|EMBL:AAZ60513.1}; EC=5.3.3.10 {ECO:0000313|EMBL:AAZ60513.1};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q473C0_CUPPJ
SCNpilot_cont_500_bf_scaffold_433_28
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26957..28621)
DNA (1665bp) protein (555aa)
3-(3-hydroxy-phenyl)propionate hydroxylase (EC:1.14.13.-); K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127]
monooxygenase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI0002893CC9
Monooxygenase {ECO:0000313|EMBL:KFD27800.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
SCNpilot_cont_500_bf_scaffold_433_29
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28957..30150)
DNA (1194bp) protein (398aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8VGJ6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJU09685.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_433_30
Burkholderia sp. SJ98, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30303..31199)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Burkholderia sp. SJ98 RepID=K8R9E1_9BURK
LysR family transcriptional regulator {ECO:0000313|EMBL:EKS70204.1}; TaxID=406819 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. SJ98.;"
transcriptional regulator
Displaying items 1-30 of 54 in total

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