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SCNpilot_cont_500_bf_scaffold_447

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Displaying items 1-30 of 109 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_447_1
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

285..491
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LE02_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69588.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(556..1908)
DNA (1353bp) protein (451aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Signal transduction histidine kinase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEN6_RHITR rbh
signal transduction histidine kinase protein rbh
SCNpilot_cont_500_bf_scaffold_447_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1912..2631)
DNA (720bp) protein (240aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFZ2_RHITR rbh
two component transcriptional regulator, winged helix family rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:AGB69586.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3054..3782
DNA (729bp) protein (243aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Pseudouridine synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHR5_RHITR rbh
tRNA pseudouridine synthase rbh
SCNpilot_cont_500_bf_scaffold_447_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3796..4479
DNA (684bp) protein (228aa)
Putative phosphoribosyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHN3_RHITR rbh
putative phosphoribosyltransferase rbh
Putative phosphoribosyltransferase {ECO:0000313|EMBL:AGB69584.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4617..5570
DNA (954bp) protein (318aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002696}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00002685};; SAICAR synthetase {ECO:0000256|HAMAP-Rule:MF_00137}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U266_9RHIZ rbh
purC2; phosphoribosylaminoimidazole-succinocarboxamide synthase rbh
SCNpilot_cont_500_bf_scaffold_447_7
unknown

Not on your lists

comp(5869..6648)
DNA (780bp) protein (260aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_447_8
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7180..7344
DNA (165bp) protein (55aa)
Nodulation protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UZZ7_9RHIZ
Nodulation protein {ECO:0000313|EMBL:ENN84457.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
TolC/NodT family protein
SCNpilot_cont_500_bf_scaffold_447_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8049..8951
DNA (903bp) protein (301aa)
SH3 type 3 domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFY7_RHITR rbh
SH3 type 3 domain-containing protein rbh
SH3 type 3 domain-containing protein {ECO:0000313|EMBL:AGB69581.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_10
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9181..9423)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6URW5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84455.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_447_11
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9655..9777)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. AP16 RepID=J2WZ05_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJK87535.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_500_bf_scaffold_447_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9870..10058)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHM8_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB69579.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10398..12794
DNA (2397bp) protein (799aa)
Penicillin-binding protein 1A n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDZ3_RHITR rbh
Penicillin-binding protein 1A {ECO:0000313|EMBL:AGB69578.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
penicillin-binding protein 1A rbh
SCNpilot_cont_500_bf_scaffold_447_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13305..15221
DNA (1917bp) protein (639aa)
Chaperone protein DnaK n=4 Tax=Rhizobium tropici RepID=L0LEN1_RHITR rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=398 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici.;"
dnaK; chaperone protein DnaK rbh
SCNpilot_cont_500_bf_scaffold_447_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15305..16441
DNA (1137bp) protein (379aa)
Chaperone protein DnaJ n=2 Tax=Rhizobium/Agrobacterium group RepID=DNAJ_AGRRK rbh
dnaJ; chaperone protein DnaJ rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16532..17350)
DNA (819bp) protein (273aa)
Streptomycin 3''-kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHQ5_RHITR rbh
streptomycin 3''-kinase rbh
Streptomycin 3''-kinase {ECO:0000313|EMBL:AGB69575.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_17
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17742..18869
DNA (1128bp) protein (376aa)
DNA replication and repair protein RecF n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHL7_RHITR rbh
DNA replication and repair protein RecF rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_18
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18906..19676
DNA (771bp) protein (257aa)
Molybdenum cofactor synthesis protein 3 n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDY8_RHITR rbh
molybdenum cofactor synthesis protein 3 rbh
Molybdenum cofactor synthesis protein 3 {ECO:0000313|EMBL:AGB69573.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19673..20152
DNA (480bp) protein (160aa)
Acetyltransferase, GNAT family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEM6_RHITR
acetyltransferase, GNAT family
Acetyltransferase, GNAT family {ECO:0000313|EMBL:AGB69572.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20180..21493)
DNA (1314bp) protein (438aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFX8_RHITR rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase rbh
SCNpilot_cont_500_bf_scaffold_447_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21635..22636)
DNA (1002bp) protein (334aa)
Glyoxylate reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHP6_RHITR rbh
glyoxylate reductase rbh
Glyoxylate reductase {ECO:0000313|EMBL:AGB69570.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22828..23367
DNA (540bp) protein (180aa)
Aspartyl-tRNA synthetase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHK6_RHITR rbh
aspartyl-tRNA synthetase rbh
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AGB69569.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23456..24067
DNA (612bp) protein (204aa)
Cadmium resistance transporter CadD n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDX5_RHITR rbh
cadD; cadmium resistance transporter CadD rbh
Cadmium resistance transporter CadD {ECO:0000313|EMBL:AGB69568.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24151..25143)
DNA (993bp) protein (331aa)
Putative sugar kinase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEM2_RHITR rbh
putative sugar kinase protein rbh
Putative sugar kinase protein {ECO:0000313|EMBL:AGB69567.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25540..26484
DNA (945bp) protein (315aa)
Auxin efflux Carrier n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LFW7_RHITR rbh
auxin efflux Carrier rbh
Auxin efflux Carrier {ECO:0000313|EMBL:AGB69566.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_26
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26604..27761
DNA (1158bp) protein (386aa)
Patatin-like phospholipase domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHM5_RHITR rbh
patatin-like phospholipase domain-containing protein rbh
Patatin-like phospholipase domain-containing protein {ECO:0000313|EMBL:AGB69565.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27824..28402)
DNA (579bp) protein (193aa)
Putative cytochrome c-like protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHI7_RHITR rbh
putative cytochrome c-like protein rbh
Putative cytochrome c-like protein {ECO:0000313|EMBL:AGB69564.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_28
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28554..29309
DNA (756bp) protein (252aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LDV9_RHITR rbh
kdsB; 3-deoxy-D-manno-octulosonate cytidylyltransferase rbh
SCNpilot_cont_500_bf_scaffold_447_29
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29334..30188
DNA (855bp) protein (285aa)
Prephenate dehydratase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LEK8_RHITR rbh
prephenate dehydratase rbh
Prephenate dehydratase {ECO:0000313|EMBL:AGB69562.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_447_30
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30372..30740)
DNA (369bp) protein (123aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LHM0_RHITR
glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:AGB69560.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Displaying items 1-30 of 109 in total

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