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SCNpilot_cont_500_bf_scaffold_937

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_937_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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162..392
DNA (231bp) protein (77aa)
ABC transporter; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34]
ABC transporter related protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZP1_9RHIZ
Iron compounds ABC transporter, ATP-binding protein {ECO:0000313|EMBL:CDN51355.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
SCNpilot_cont_500_bf_scaffold_937_2
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

389..1123
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZP2_9RHIZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CDN51356.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_937_3
Martelella endophytica, Martelella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1253..1693
DNA (441bp) protein (147aa)
hypothetical protein n=1 Tax=Martelella mediterranea RepID=UPI000363F7F8
Uncharacterized protein {ECO:0000313|EMBL:AJY47126.1}; TaxID=1486262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Martelella.;" source="Martelella endophytica.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_937_4
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1686..2198
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZP3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EHS54105.1}; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_937_5
Rhizobium sp. PDO1-076, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2176..3348
DNA (1173bp) protein (391aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Rhizobium sp. PDO1-076 RepID=H4EZN9_9RHIZ
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:EHS54101.1}; Flags: Precursor;; TaxID=1125979 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. PDO1-076.;"
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_937_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3410..4018
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HU00_ACHXA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADP18573.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_500_bf_scaffold_937_7
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4015..4704
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6AWA2_RHILS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS55940.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_cont_500_bf_scaffold_937_8
Vibrio maritimus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5304..5660)
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Vibrio harveyi 1DA3 RepID=D0X5I0_VIBHA
Uncharacterized protein {ECO:0000313|EMBL:GAL31568.1}; TaxID=990268 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio maritimus.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_937_9

Not on your lists

5828..6733
DNA (906bp) protein (302aa)
Putative LysR family transcriptional regulator n=1 Tax=mixed culture bacterium NP30 RepID=T2D2H8_9BACT
Putative LysR family transcriptional regulator {ECO:0000313|EMBL:AGV40331.1}; TaxID=1398723 species="Bacteria.;" source="mixed culture bacterium NP30.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_937_10
unknown

Not on your lists

7266..7442
DNA (177bp) protein (59aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_937_11
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8107..8955)
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00035EE680 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGM35269.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_937_12
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9343..10485
DNA (1143bp) protein (381aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EP7_MESSB
glycosyl transferase family protein
Glycosyl transferase, group 2 family protein {ECO:0000313|EMBL:ABG64128.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
SCNpilot_cont_500_bf_scaffold_937_13
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10681..11577)
DNA (897bp) protein (299aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Rhizobium sp. AP16 RepID=J2DAJ4_9RHIZ rbh
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:EJK86904.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
metallo-beta-lactamase superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_937_14
Mesorhizobium amorphae, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11603..12241)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Mesorhizobium amorphae CCNWGS0123 RepID=G6YKW6_9RHIZ
Putative uncharacterized protein {ECO:0000313|EMBL:EHH03481.1}; TaxID=1082933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium amorphae CCNWGS0123.;"
hypothetical protein; K07396 putative protein-disulfide isomerase
SCNpilot_cont_500_bf_scaffold_937_15
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12342..13256
DNA (915bp) protein (305aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. AP16 RepID=J2WV41_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EJK86903.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
transcriptional regulator protein rbh
SCNpilot_cont_500_bf_scaffold_937_16
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14164..15756
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037F0962 rbh
Uncharacterized protein {ECO:0000313|EMBL:EJC72183.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_937_17
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15786..16772
DNA (987bp) protein (329aa)
UbiA prenyltransferase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003622434 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAK10538.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_937_18
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16769..17473
DNA (705bp) protein (235aa)
Haloacid dehalogenase superfamily enzyme, subfamily IA n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0C007_RHILT rbh
Haloacid dehalogenase superfamily enzyme, subfamily IA {ECO:0000313|EMBL:EJC72185.1}; TaxID=754522 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM2012.;"
putative hydrolase; K07025 putative hydrolase of the HAD superfamily rbh
SCNpilot_cont_500_bf_scaffold_937_19
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17470..17835
DNA (366bp) protein (122aa)
transmembrane polysaccharide synthesis protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000370BED6
putative transmembrane polysaccharide synthesis protein
Putative transmembrane polysaccharide synthesis protein {ECO:0000313|EMBL:CAK10536.1}; TaxID=216596 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae (strain 3841).;"
SCNpilot_cont_500_bf_scaffold_937_20
unknown

Not on your lists

17984..18157
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000369D475
SCNpilot_cont_500_bf_scaffold_937_21
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18527..19252)
DNA (726bp) protein (242aa)
Phophonate C-P lyase system transcriptional regulator PhnF, GntR family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LNP5_DESBD
GntR family transcriptional regulator; K02043 GntR family transcriptional regulator, phosphonate transport system regulatory protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
SCNpilot_cont_500_bf_scaffold_937_22
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19688..20596
DNA (909bp) protein (303aa)
Phosphonate ABC transporter, periplasmic phosphonate binding protein n=3 Tax=Rhizobium RepID=J1SZV9_9RHIZ
Phosphonate ABC transporter, periplasmic phosphonate binding protein {ECO:0000313|EMBL:EJJ30788.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
phnD; phosphonate ABC transporter substrate-binding protein PhnD
SCNpilot_cont_500_bf_scaffold_937_23
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20717..21709)
DNA (993bp) protein (331aa)
Putative amidohydrolase n=1 Tax=Rhizobium sp. AP16 RepID=J2DBM1_9RHIZ rbh
Putative amidohydrolase {ECO:0000313|EMBL:EJK87304.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
amidohydrolase rbh
SCNpilot_cont_500_bf_scaffold_937_24
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22111..22320
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LNH2_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB72266.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_937_25
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22461..23486)
DNA (1026bp) protein (342aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF142 RepID=J2KVM1_9RHIZ rbh
Transcriptional regulator {ECO:0000313|EMBL:EJJ25237.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
periplasmic binding protein/LacI transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_937_26
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23693..24976
DNA (1284bp) protein (428aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI00036174D8 rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJJ25238.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
extracellular solute-binding protein
SCNpilot_cont_500_bf_scaffold_937_27
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25098..26006
DNA (909bp) protein (303aa)
Permease component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF142 RepID=J2KWS0_9RHIZ rbh
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EJJ25239.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
ABC transporter permease
SCNpilot_cont_500_bf_scaffold_937_28
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26003..26854
DNA (852bp) protein (284aa)
sugar ABC transporter permease n=1 Tax=Rhizobium sp. JGI 0001005-K05 RepID=UPI0003815778 rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EJJ25240.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
CUT1 family carbohydrate ABC transporter membrane protein 2; K02026 multiple sugar transport system permease protein
SCNpilot_cont_500_bf_scaffold_937_29
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26872..29466
DNA (2595bp) protein (865aa)
Putative bile acid beta-glucosidase n=1 Tax=Rhizobium sp. CF142 RepID=J1T0V3_9RHIZ rbh
Putative bile acid beta-glucosidase {ECO:0000313|EMBL:EJJ25241.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_937_30
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29466..30572
DNA (1107bp) protein (369aa)
ATPase component of ABC-type sugar transporter n=1 Tax=Rhizobium sp. CF142 RepID=J2KVM6_9RHIZ rbh
ATPase component of ABC-type sugar transporter {ECO:0000313|EMBL:EJJ25242.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
sugar ABC transporter ATP-binding protein; K02023 multiple sugar transport system ATP-binding protein
Displaying items 1-30 of 35 in total

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