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SCNpilot_cont_500_bf_scaffold_1148

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1148_1
Neorhizobium galegae, Neorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(175..1248)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036F11AB rbh
FAD-binding 9 siderophore-interacting domain protein {ECO:0000313|EMBL:CDN52305.1}; TaxID=399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Neorhizobium.;" source="Rhizobium galegae.;"
Siderophore-interacting protein rbh
SCNpilot_cont_500_bf_scaffold_1148_2
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1245..2081)
DNA (837bp) protein (279aa)
cobalamin/Fe3+-siderophore ABC transporter ATPase; K02013 iron complex transport system ATP-binding protein [EC:3.6.3.34] rbh
iron-dicitrate ABC transporter ATP-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000372FD2E rbh
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component {ECO:0000313|EMBL:EJJ31342.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_500_bf_scaffold_1148_3
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2078..3118)
DNA (1041bp) protein (347aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036C8B45 rbh
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:EUB98572.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
Fe3+-siderophore ABC transporter permease; K02015 iron complex transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1148_4
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3115..4161)
DNA (1047bp) protein (349aa)
ABC transporter permease n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000379786B rbh
Iron ABC transporter permease {ECO:0000313|EMBL:KGE02023.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
putative iron uptake protein; K02015 iron complex transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1148_5
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4158..5168)
DNA (1011bp) protein (337aa)
ABC transporter substrate-binding protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI000366928C rbh
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:EUB98574.1}; Flags: Precursor;; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
ABC-type Fe3+-hydroxamate transport system, periplasmic component
SCNpilot_cont_500_bf_scaffold_1148_6
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5484..7622
DNA (2139bp) protein (713aa)
ligand-gated channel n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00035DF35A rbh
Ligand-gated channel {ECO:0000313|EMBL:KEQ04132.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
TonB-dependent siderophore receptor rbh
SCNpilot_cont_500_bf_scaffold_1148_7
Rhizobium sp. CF080, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7668..8543)
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Rhizobium sp. 2MFCol3.1 RepID=UPI00036B7FDC rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EUB98576.1}; TaxID=1144310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF080.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1148_8
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9340..9753)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. CF142 RepID=J2KYA3_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJJ26202.1}; Flags: Precursor;; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1148_9
Rhizobium mesoamericanum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9924..10322)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Rhizobium mesoamericanum STM3625 RepID=K0Q1Y5_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:CCM78350.1}; TaxID=1211777 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium mesoamericanum STM3625.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1148_10
Rhizobium sp. Pop5, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10387..10824)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Rhizobium sp. Pop5 RepID=K0VJ27_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EJZ18957.1}; TaxID=1223565 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. Pop5.;"
curlin associated
SCNpilot_cont_500_bf_scaffold_1148_11
Paenibacillus sp. MSt1, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11433..12230)
DNA (798bp) protein (266aa)
alpha/beta hydrolase fold protein; K01055 3-oxoadipate enol-lactonase [EC:3.1.1.24]
alpha/beta hydrolase n=1 Tax=Paenibacillus elgii RepID=UPI000248C4FA rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KEQ21954.1}; TaxID=1501230 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. MSt1.;"
SCNpilot_cont_500_bf_scaffold_1148_12
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12257..13444)
DNA (1188bp) protein (396aa)
Major facilitator superfamily MFS_1 n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FSQ7_PHAMO rbh
Major Facilitator Superfamily protein {ECO:0000313|EMBL:CDG81218.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium agaricidamnosum NBRC 102515 = DSM 9628.;"
transporter rbh
SCNpilot_cont_500_bf_scaffold_1148_13
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13562..14056
DNA (495bp) protein (165aa)
MarR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI00037032D9
HTH-type transcriptional regulator PecS {ECO:0000313|EMBL:CDX14424.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_1148_14
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14866..16758
DNA (1893bp) protein (631aa)
Putative Tetratricopeptide TPR_4 n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0T9C1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:KEZ03752.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1148_15
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16992..17891)
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI000360E361
Uncharacterized protein {ECO:0000313|EMBL:EYR79138.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1148_16
Hoeflea sp. BRH_c9, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18260..18628)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D937F
Uncharacterized protein {ECO:0000313|EMBL:KJS16732.1}; TaxID=1629712 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BRH_c9.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1148_17
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

comp(18871..19110)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWR2_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EHO43038.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1148_18
Agrobacterium vitis, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19276..19776)
DNA (501bp) protein (167aa)
Two component sensor kinase n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JRE8_AGRVS
two component sensor kinase
Two component sensor kinase {ECO:0000313|EMBL:ACM37559.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;"
SCNpilot_cont_500_bf_scaffold_1148_19
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21256..22140
DNA (885bp) protein (295aa)
Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JJP0_AGRRK rbh
transcriptional regulator protein rbh
DNA-binding domain-containing protein, AraC-type {ECO:0000313|EMBL:EJK82472.1}; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_500_bf_scaffold_1148_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22461..22901
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSG7_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB74172.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1148_21
Mesorhizobium sp. SOD10, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22898..25099
DNA (2202bp) protein (734aa)
UPI0003CF015D related cluster n=1 Tax=unknown RepID=UPI0003CF015D
YadA domain protein {ECO:0000313|EMBL:CDX41801.1}; TaxID=1505946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. SOD10.;"
rzcA; rhizobiocin/RTX toxin and hemolysin-type calcium binding protein
Displaying 21 items

View Taxonomy