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SCNpilot_cont_500_bf_scaffold_1231

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1231_1
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249..842)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07H06_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:KEQ04801.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1231_2
Rhizobium sp. R2-400B4, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(839..1171)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07H05_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:KEQ04802.1}; TaxID=1509404 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. R2-400B4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1231_3
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1653..2684
DNA (1032bp) protein (344aa)
phosphonate ABC transporter substrate-binding protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003685172 rbh
2-aminoethylphosphonate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD21820.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
2-aminoethylphosphonate ABC transporter substrate-binding protein; K11081 2-aminoethylphosphonate transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1231_4
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2684..3832
DNA (1149bp) protein (383aa)
phosphonate ABC transporter ATP-binding protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000371E7D2
Phosphonate ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD21819.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
ABC transporter; K11084 2-aminoethylphosphonate transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1231_5
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3825..4694
DNA (870bp) protein (290aa)
2-aminoethylphosphonate ABC transporter, permease protein n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WMN5_BURSC
2-aminoethylphosphonate transport system permease PhnU {ECO:0000313|EMBL:KHD21818.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
2-aminoethylphosphonate ABC transporter permease; K11083 2-aminoethylphosphonate transport system permease protein
SCNpilot_cont_500_bf_scaffold_1231_6
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4678..5475
DNA (798bp) protein (266aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Burkholderia sp. (strain CCGE1002) RepID=D5WMN4_BURSC rbh
Phosphonate ABC transporter permease {ECO:0000313|EMBL:KHD21744.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
binding-protein-dependent transporters inner membrane component; K11082 2-aminoethylphosphonate transport system permease protein rbh
SCNpilot_cont_500_bf_scaffold_1231_7
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5582..6484
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI000370BC52
putative transcriptional regulator
Tax=BJP_08E140C01_Roseovarius_63_250
SCNpilot_cont_500_bf_scaffold_1231_8
Bartonella tamiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6609..7754
DNA (1146bp) protein (382aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037B247E rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EJF89005.1}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.;"
FAD dependent oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_1231_9
Bartonella tamiae, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7760..8563
DNA (804bp) protein (268aa)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=1094558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella tamiae Th239.;"
phnX; phosphonoacetaldehyde hydrolase; K05306 phosphonoacetaldehyde hydrolase [EC:3.11.1.1]
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003810FD0 rbh
SCNpilot_cont_500_bf_scaffold_1231_10
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8959..10719
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036DAE35
Uncharacterized protein {ECO:0000313|EMBL:KAJ56033.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
putative Transcriptional regulator of sugar metabolism DeoR fused with ABC-type sugar transport system, periplasmic component
SCNpilot_cont_500_bf_scaffold_1231_11
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10748..11965
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI0003713AEA rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KAJ56032.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
putative ABC-type sugar transport system, periplasmic component rbh
SCNpilot_cont_500_bf_scaffold_1231_12
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12023..12907
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI000360F2D9 rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:KAJ56031.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
putative ABC-type sugar transport system, permease component rbh
SCNpilot_cont_500_bf_scaffold_1231_13
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12904..13731
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035C4C42 rbh
ABC transporter permease {ECO:0000313|EMBL:KAJ56030.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
putative ABC-type transport system, permease component rbh
SCNpilot_cont_500_bf_scaffold_1231_14
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13735..14514
DNA (780bp) protein (260aa)
putative Enoyl-CoA hydratase (EC:4.2.1.17)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037B27DE rbh
3-hydroxybutyryl-CoA dehydratase {ECO:0000313|EMBL:KAJ56029.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
SCNpilot_cont_500_bf_scaffold_1231_15
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14517..15275
DNA (759bp) protein (253aa)
putative 3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00035CE908
Short-chain dehydrogenase {ECO:0000313|EMBL:KAJ56028.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
SCNpilot_cont_500_bf_scaffold_1231_16
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15275..16357
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036812B1
Uncharacterized protein {ECO:0000313|EMBL:KAJ56027.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1231_17
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16359..17411
DNA (1053bp) protein (351aa)
Sugar ABC transporter n=1 Tax=Achromobacter piechaudii HLE RepID=J4Y3J9_9BURK rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KAJ56026.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
ABC transporter ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1231_18
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17408..18541
DNA (1134bp) protein (378aa)
Uncharacterized protein n=2 Tax=Streptomyces lividans RepID=S1S0M4_STRLI
Uncharacterized protein {ECO:0000313|EMBL:KAJ56024.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
SCF41.22; hypothetical protein; K02027 multiple sugar transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_1231_19
Actibacterium mucosum, Actibacterium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18558..19781
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00036C7A8C rbh
Carnitine dehydratase {ECO:0000313|EMBL:KAJ56023.1}; TaxID=1454373 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium mucosum KCTC 23349.;"
putative CoA-transferase family III (CaiB/BaiF) rbh
SCNpilot_cont_500_bf_scaffold_1231_20
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19976..20446
DNA (471bp) protein (157aa)
MEKHLA domain-containing protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LVW4_RHITR
MEKHLA domain-containing protein
MEKHLA domain-containing protein {ECO:0000313|EMBL:AGB74294.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1231_21
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20583..21539
DNA (957bp) protein (319aa)
LysR-family transcriptional regulator n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TXK9_TISMK rbh
cynR; LysR family transcriptional regulator rbh
LysR-family transcriptional regulator {ECO:0000313|EMBL:AFK57497.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
SCNpilot_cont_500_bf_scaffold_1231_22
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21758..22471
DNA (714bp) protein (238aa)
NAD-dependent formate dehydrogenase; K00122 formate dehydrogenase [EC:1.2.1.2]
NAD-dependent formate dehydrogenase {ECO:0000313|EMBL:BAK66590.1}; EC=1.2.1.2 {ECO:0000313|EMBL:BAK66590.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
formate dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037206A2
SCNpilot_cont_500_bf_scaffold_1231_23
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22550..22960
DNA (411bp) protein (137aa)
formate dehydrogenase (EC:1.2.1.2); K00122 formate dehydrogenase [EC:1.2.1.2]
Formate dehydrogenase {ECO:0000313|EMBL:BAI76253.1}; EC=1.2.1.2 {ECO:0000313|EMBL:BAI76253.1};; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
formate dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI00037206A2
SCNpilot_cont_500_bf_scaffold_1231_24
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23030..23539
DNA (510bp) protein (170aa)
HPP-family protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IT81_9SPHN
HPP-family protein
HPP-family protein {ECO:0000313|EMBL:BAK66591.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
Displaying 24 items

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