ggKbase home page

SCNpilot_cont_500_bf_scaffold_1473

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1473_1
Rhizobium sp. AP16, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..109
DNA (108bp) protein (36aa)
Ferrichrome-iron transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JI05_AGRRK
fhuA; ferrichrome-iron transporter; K02014 iron complex outermembrane recepter protein
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EJK79929.1}; Flags: Precursor;; TaxID=1144306 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. AP16.;"
SCNpilot_cont_500_bf_scaffold_1473_2
unknown

Not on your lists

comp(361..522)
DNA (162bp) protein (54aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1473_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(519..2510)
DNA (1992bp) protein (664aa)
FhuB-like siderophore ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUG5_RHITR rbh
FhuB-like siderophore ABC transporter, permease protein {ECO:0000313|EMBL:AGB74933.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
FhuB-like siderophore ABC transporter, permease protein rbh
SCNpilot_cont_500_bf_scaffold_1473_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2507..3412)
DNA (906bp) protein (302aa)
FhuD-like siderophore ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUM2_RHITR rbh
FhuD-like siderophore ABC transporter, substrate-binding protein rbh
FhuD-like siderophore ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB74932.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3402..4214)
DNA (813bp) protein (271aa)
FhuC-like siderophore ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW43_RHITR rbh
FhuC-like siderophore ABC transporter, ATP-binding protein rbh
FhuC-like siderophore ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74931.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4275..4802)
DNA (528bp) protein (176aa)
Siderophore acetylase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXS6_RHITR
siderophore acetylase protein
Siderophore acetylase protein {ECO:0000313|EMBL:AGB74930.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4799..5392)
DNA (594bp) protein (198aa)
RNA polymerase sigma factor, ECF subfamily n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXP0_RHITR rbh
RNA polymerase sigma factor, ECF subfamily rbh
RNA polymerase sigma factor, ECF subfamily {ECO:0000313|EMBL:AGB74929.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5557..6276)
DNA (720bp) protein (240aa)
4'-phosphopantetheinyl transferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUG0_RHITR rbh
4'-phosphopantetheinyl transferase rbh
4'-phosphopantetheinyl transferase {ECO:0000313|EMBL:AGB74928.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6278..7597)
DNA (1320bp) protein (440aa)
L-lysine 6-monooxygenase (Lysine 6-N-hydroxylase)(Lysine N(6)-hydroxylase) (Lysine-N-oxygenase) n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUL6_RHITR rbh
L-lysine 6-monooxygenase (Lysine 6-N-hydroxylase)(Lysine N(6)-hydroxylase) (Lysine-N-oxygenase) rbh
L-lysine 6-monooxygenase (Lysine 6-N-hydroxylase)(Lysine N(6)-hydroxylase) (Lysine-N-oxygenase) {ECO:0000313|EMBL:AGB74927.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7630..11607)
DNA (3978bp) protein (1326aa)
Siderophore biosynthesis non-ribosomal peptide synthase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW40_RHITR rbh
Siderophore biosynthesis non-ribosomal peptide synthase protein {ECO:0000313|EMBL:AGB74926.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
siderophore biosynthesis non-ribosomal peptide synthase protein rbh
SCNpilot_cont_500_bf_scaffold_1473_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11935..13086
DNA (1152bp) protein (384aa)
N6-hydroxylysine O-acetyltransferase protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXS2_RHITR rbh
N6-hydroxylysine O-acetyltransferase protein rbh
N6-hydroxylysine O-acetyltransferase protein {ECO:0000313|EMBL:AGB74925.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13086..14456
DNA (1371bp) protein (457aa)
Multidrug and toxin extrusion (MATE) family efflux pump n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXN6_RHITR rbh
multidrug and toxin extrusion (MATE) family efflux pump rbh
Multidrug and toxin extrusion (MATE) family efflux pump {ECO:0000313|EMBL:AGB74924.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14472..15653
DNA (1182bp) protein (394aa)
Methionine gamma-lyase (L-methioninase) n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUF5_RHITR rbh
methionine gamma-lyase (L-methioninase) rbh
Methionine gamma-lyase (L-methioninase) {ECO:0000313|EMBL:AGB74923.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_14
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15760..17010
DNA (1251bp) protein (417aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Diaminopimelate decarboxylase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUL1_RHITR rbh
diaminopimelate decarboxylase rbh
SCNpilot_cont_500_bf_scaffold_1473_15
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17110..18582
DNA (1473bp) protein (491aa)
Cytochrome P450 n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXY1_9RHIZ rbh
Cytochrome P450 {ECO:0000313|EMBL:ENN85611.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
cytochrome P450 rbh
SCNpilot_cont_500_bf_scaffold_1473_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18585..19580
DNA (996bp) protein (332aa)
Putative lauroyl/myristoyl acyltransferase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXR8_RHITR rbh
putative lauroyl/myristoyl acyltransferase rbh
Putative lauroyl/myristoyl acyltransferase {ECO:0000313|EMBL:AGB74920.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1473_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19883..20923
DNA (1041bp) protein (347aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LS76_RHITR rbh
rfbB; dTDP-glucose 4,6-dehydratase rbh
Displaying 17 items

View Taxonomy