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SCNpilot_cont_500_bf_scaffold_1525

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1525_1
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218..520)
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00035D6C9D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EJC70212.1}; TaxID=755176 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. viciae WSM1455.;"
SCNpilot_cont_500_bf_scaffold_1525_2
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(517..780)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Rhizobium gallicum RepID=UPI00035D7C0B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS55337.1}; TaxID=395491 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii (strain WSM1325).;"
SCNpilot_cont_500_bf_scaffold_1525_3

Not on your lists

comp(1223..1465)
DNA (243bp) protein (81aa)
Ribosomal protein S21 n=1 Tax=uncultured organism RepID=T1W9Y9_9ZZZZ
Ribosomal protein S21 {ECO:0000313|EMBL:AGU11339.1}; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
30S ribosomal protein S21
SCNpilot_cont_500_bf_scaffold_1525_4
unknown

Not on your lists

comp(1582..1797)
DNA (216bp) protein (72aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1525_5
Rhizobium sp. CF142, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1867..2076)
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UF57_RHIRD
cspC1; cold-shock protein CspC
Cold shock protein {ECO:0000313|EMBL:EJJ28438.1}; TaxID=1144314 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF142.;"
SCNpilot_cont_500_bf_scaffold_1525_6
unknown

Not on your lists

comp(2573..2731)
DNA (159bp) protein (53aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1525_7
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2757..2972)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UVL4_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ENN84801.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
SCNpilot_cont_500_bf_scaffold_1525_8
unknown

Not on your lists

comp(3682..3954)
DNA (273bp) protein (91aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1525_9
Sphingomonas sp. JE1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4326..5198)
DNA (873bp) protein (291aa)
UPI0003CF2812 related cluster n=1 Tax=unknown RepID=UPI0003CF2812 rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:AJW29567.1}; TaxID=1628059 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. JE1.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1525_10
Sphingomonas sp. JE1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5331..6074
DNA (744bp) protein (248aa)
UPI0003CE889E related cluster n=1 Tax=unknown RepID=UPI0003CE889E rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AJW29566.1}; TaxID=1628059 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. JE1.;"
short-chain dehydrogenase/reductase SDR rbh
SCNpilot_cont_500_bf_scaffold_1525_11
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6088..6429
DNA (342bp) protein (114aa)
UPI0003CED260 related cluster n=1 Tax=unknown RepID=UPI0003CED260
Uncharacterized protein {ECO:0000313|EMBL:ESY73776.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1525_12
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6729..7475)
DNA (747bp) protein (249aa)
putative short-chain dehydrogenase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] rbh
Putative short-chain dehydrogenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XND6_9PROT rbh
Putative short-chain dehydrogenase {ECO:0000313|EMBL:EKM98194.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
SCNpilot_cont_500_bf_scaffold_1525_13
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7502..7882)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YSX9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKM98193.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1525_14
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7908..8654)
DNA (747bp) protein (249aa)
Oxidoreductase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YTK2_9PROT rbh
Oxidoreductase {ECO:0000313|EMBL:EKM98192.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1525_15
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8736..9572)
DNA (837bp) protein (279aa)
Tyrosyl-tRNA synthetase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IPW3_9BRAD rbh
Tyrosyl-tRNA synthetase {ECO:0000313|EMBL:ERF84789.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
alpha/beta hydrolase fold protein rbh
SCNpilot_cont_500_bf_scaffold_1525_16
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9599..10345)
DNA (747bp) protein (249aa)
Putative short-chain dehydrogenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZEY7_9PROT rbh
Putative short-chain dehydrogenase {ECO:0000313|EMBL:EKM98190.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative short-chain dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_1525_17
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10520..11428
DNA (909bp) protein (303aa)
LysR family transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XND2_9PROT rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EKM98189.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hcaR; transcriptional regulator, LysR family rbh
SCNpilot_cont_500_bf_scaffold_1525_18
unknown

Not on your lists

comp(12128..12316)
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1525_19
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12414..12902)
DNA (489bp) protein (163aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CCAE3
Uncharacterized protein {ECO:0000313|EMBL:AJK49917.1}; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1525_20
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12916..13662)
DNA (747bp) protein (249aa)
3-oxoacyl-[acyl-carrier protein] reductase FabG {ECO:0000313|EMBL:AJK49918.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AJK49918.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glumae PG1.;"
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB198 rbh
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_1525_21
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13753..14727)
DNA (975bp) protein (325aa)
short-chain dehydrogenase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB196 rbh
ABC transporter subfamily C PrsD {ECO:0000313|EMBL:ERF84753.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_1525_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14843..15454
DNA (612bp) protein (204aa)
TetR family transcriptional regulator n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB195 rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KIZ43231.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
transcriptional regulator, TetR family
SCNpilot_cont_500_bf_scaffold_1525_23
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15664..16044)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036D5878
Uncharacterized protein {ECO:0000313|EMBL:EPR23517.1}; TaxID=1336745 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium radiobacter DSM 30147.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1525_24
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16742..17626
DNA (885bp) protein (295aa)
NmrA family transcriptional regulator n=1 Tax=Rhizobium leguminosarum RepID=UPI00036756A9 rbh
NmrA family protein rbh
NmrA family protein {ECO:0000313|EMBL:ACB95455.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
SCNpilot_cont_500_bf_scaffold_1525_25
Mumia flava, Mumia, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17648..18022
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036752E3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHL14098.1}; TaxID=1348852 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Mumia.;" source="Mumia flava.;"
SCNpilot_cont_500_bf_scaffold_1525_26
Burkholderia phenoliruptrix, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18088..18804
DNA (717bp) protein (239aa)
short-chain dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI000372F404 rbh
short-chain dehydrogenase rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AFT89984.1}; TaxID=1229205 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia phenoliruptrix BR3459a.;"
SCNpilot_cont_500_bf_scaffold_1525_27
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18884..19342
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000372784E
transcriptional regulator, MarR family
Transcriptional regulator, MarR family {ECO:0000313|EMBL:AGB75500.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1525_28
Rhizobium sp. LPU83, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19678..19845)
DNA (168bp) protein (56aa)
Uncharacterized protein {ECO:0000313|EMBL:CDM61157.1}; TaxID=348824 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. LPU83.;"
SCNpilot_cont_500_bf_scaffold_1525_29
Rhizobium leguminosarum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20180..20545
DNA (366bp) protein (122aa)
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM597 RepID=J0H9N0_RHILT
Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain {ECO:0000313|EMBL:EJB07115.1}; TaxID=754764 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium leguminosarum bv. trifolii WSM597.;"
response regulator receiver protein
SCNpilot_cont_500_bf_scaffold_1525_30
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20650..21144)
DNA (495bp) protein (165aa)
sensory transduction histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037EA5BB
Sensory transduction histidine kinase {ECO:0000313|EMBL:ADY68117.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
Displaying items 1-30 of 37 in total

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