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SCNpilot_cont_500_bf_scaffold_1994

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1994_1
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1005
DNA (1005bp) protein (335aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=M4MFX0_RHIML rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAK65181.2}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_cont_500_bf_scaffold_1994_2
unknown

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1188..1403
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Sinorhizobium meliloti GR4 RepID=M4IJI3_RHIML
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1994_3
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1621..1872
DNA (252bp) protein (84aa)
Probable plasmid stabilization protein n=2 Tax=Rhizobium etli RepID=B3Q493_RHIE6
putative plasmid stabilization protein
Putative toxin-antitoxin system toxin component {ECO:0000313|EMBL:GAJ97136.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;"
SCNpilot_cont_500_bf_scaffold_1994_4
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1869..2177
DNA (309bp) protein (103aa)
Probable plasmid stabilization protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3Q492_RHIE6
putative plasmid stabilization protein
Probable plasmid stabilization protein {ECO:0000313|EMBL:ACE94896.1}; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
SCNpilot_cont_500_bf_scaffold_1994_5
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2373..3461)
DNA (1089bp) protein (363aa)
AttC protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AI23_RHIFH rbh
attC; Spermidine/putrescine-binding periplasmic protein SPBP rbh
Putative ABC transporter substrate binding protein {ECO:0000313|EMBL:CCF00705.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_1994_6
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3509..4375)
DNA (867bp) protein (289aa)
AttB-like ABC transporter, permease protein AttB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X6L4_RHIFR rbh
attB; AttB-like ABC transporter, permease protein AttB rbh
AttB-like ABC transporter, permease protein AttB {ECO:0000313|EMBL:AFL51520.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_1994_7
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4365..5168)
DNA (804bp) protein (268aa)
Spermidine/putrescine transport system permease protein PotB n=1 Tax=Sinorhizobium fredii USDA 257 RepID=I3X6L5_RHIFR rbh
potB3; spermidine/putrescine transport system permease PotB rbh
Spermidine/putrescine transport system permease protein PotB {ECO:0000313|EMBL:AFL51521.1}; TaxID=1185652 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Sinorhizobium fredii USDA 257.;"
SCNpilot_cont_500_bf_scaffold_1994_8
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5267..6385)
DNA (1119bp) protein (373aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=394 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium sp. (strain NGR234).;"
AttA1-like ABC transporter, ATP binding protein n=1 Tax=Rhizobium sp. (strain NGR234) RepID=C3KR04_RHISN rbh
attA2; AttA1-like ABC transporter ATP binding protein; K11080 mannopine transport system ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1994_9
Ochrobactrum intermedium, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6639..7328
DNA (690bp) protein (230aa)
Transcriptional regulator,GntR family n=2 Tax=Rhizobium meliloti RepID=M4MFY2_RHIML rbh
Transcriptional regulator,GntR family rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:ELT48206.1}; TaxID=1234597 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum intermedium M86.;"
SCNpilot_cont_500_bf_scaffold_1994_10
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7435..8778
DNA (1344bp) protein (448aa)
atrB; glutamate-1-semialdehyde 2,1-aminomutase; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
Putative glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000313|EMBL:CCF00700.1}; EC=5.4.3.8 {ECO:0000313|EMBL:CCF00700.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
Glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9AI18_RHIFH rbh
SCNpilot_cont_500_bf_scaffold_1994_11
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8778..10493
DNA (1716bp) protein (572aa)
atrC; putative acetolactate synthase large subunit; K01652 acetolactate synthase I/II/III large subunit [EC:2.2.1.6] rbh
Putative acetolactate synthase large subunit {ECO:0000313|EMBL:CCF00699.1}; EC=2.2.1.6 {ECO:0000313|EMBL:CCF00699.1};; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
acetolactate synthase n=1 Tax=Rhizobium sp. (strain BR816) RepID=UPI00037A4AFA rbh
SCNpilot_cont_500_bf_scaffold_1994_12
Sinorhizobium meliloti, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10490..11266
DNA (777bp) protein (259aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100) rbh
3-ketoacyl-ACP reductase n=1 Tax=Rhizobium meliloti RepID=UPI0002F8E2B2 rbh
Short chain alcohol dehydrogenase-related dehydrogenase {ECO:0000313|EMBL:AAK65178.1}; TaxID=266834 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium; meliloti).;"
SCNpilot_cont_500_bf_scaffold_1994_13
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11288..11980
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Rhizobium giardinii RepID=UPI00036C2EAE
phob5; transcriptional regulatory protein resD
Putative response regulator of two-component system {ECO:0000313|EMBL:CCF00697.1}; TaxID=1117943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.;" source="Rhizobium fredii (strain HH103) (Sinorhizobium fredii).;"
SCNpilot_cont_500_bf_scaffold_1994_14
unknown

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comp(12209..12916)
DNA (708bp) protein (236aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1994_15
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13063..14352)
DNA (1290bp) protein (430aa)
Hemolysin protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LU88_RHITR rbh
hemolysin protein rbh
Hemolysin protein {ECO:0000313|EMBL:AGB74858.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1994_16
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14462..15370)
DNA (909bp) protein (303aa)
Luciferase family protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUE5_RHITR rbh
luciferase family protein rbh
Luciferase family protein {ECO:0000313|EMBL:AGB74857.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_1994_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15545..15916)
DNA (372bp) protein (124aa)
PsiF repeat-containing protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U643_9RHIZ
PsiF repeat-containing protein {ECO:0000313|EMBL:ENN85768.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
PsiF repeat protein
SCNpilot_cont_500_bf_scaffold_1994_18
unknown

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comp(16058..16126)
DNA (69bp) protein (23aa)

This feature has no annotations

Displaying 18 items

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