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SCNpilot_cont_500_bf_scaffold_9_48

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(48670..49086)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9JGI8_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 138.0
  • Bit_score: 240
  • Evalue 7.80e-61
transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 85.5
  • Coverage: 138.0
  • Bit_score: 240
  • Evalue 2.40e-61
Transcriptional regulator {ECO:0000313|EMBL:KEA06442.1}; TaxID=359 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium rhizogenes.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 138.0
  • Bit_score: 240
  • Evalue 1.10e-60

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
TTGAGCAGCAGCACCGTCGTCAATCTTCGCAACACGAAGCCGCAATTGCGCGCCGTCGATATCAGTAAGGTCACGTTTACGGATTGTCCGGTGCGGGATCTGGTCTCGCAGATCGGCGGCAAATGGTCGGTGCTGTTGCTGGAGGCTCTGGCGCAAAAGCCCTATCGTTTCGGCGAGCTGCGCCGCATGGTGCCCGATATTTCCCAGCGCATGTTGACTCAGACGCTGCGCGAACTCCAGCGCGATGGCTATATCGGCCGCGAGGTCTTCCCGACCAAGCCGCCGAGCGTCGAATACCGTATGACCGATCTTGGCTATTCGCTCTATGAGCCGCTGGCGCAGCTCTTGAACTGGGCAGAAGCCAATCACGAGGCCGTTCGGACCGCGCGCGCCCGTTTCGATCAATCGCCGGACTGA
PROTEIN sequence
Length: 139
LSSSTVVNLRNTKPQLRAVDISKVTFTDCPVRDLVSQIGGKWSVLLLEALAQKPYRFGELRRMVPDISQRMLTQTLRELQRDGYIGREVFPTKPPSVEYRMTDLGYSLYEPLAQLLNWAEANHEAVRTARARFDQSPD*