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SCNpilot_cont_500_bf_scaffold_124_127

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 119261..120901

Top 3 Functional Annotations

Value Algorithm Source
ABC-type dipeptide transport system, periplasmic component n=1 Tax=Rhizobium sp. CF142 RepID=J1SHY5_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 69.3
  • Coverage: 548.0
  • Bit_score: 797
  • Evalue 8.50e-228
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KGD96616.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.6
  • Coverage: 547.0
  • Bit_score: 803
  • Evalue 2.20e-229
oligopeptide ABC transporter substrate-binding protein; K02035 peptide/nickel transport system substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 543.0
  • Bit_score: 403
  • Evalue 1.10e-109

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Taxonomy

Rhizobium sp. YS-1r → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1641
ATGCACACGACTTTCAAGACCTTCGCTCGAGCTGCCGTGATAAGCAGCCTGTTCCTCGGCGTCGCCTCCTCGGCCTGGGCACGCGACACCATCATCAACGTCGCCGTGCAGTCCATGGGCACAGCTGGTTCGATCGAGATCAACGAGAACAACGGCACGGCTGCACGCAAATTCCAGAATTCCGTGTTCGAACAGCTTATCGCACTTGATCTGCAAGACCCCAATCTCGCGTTCAAACCCGGTCTGGCCAGTGAGTGGAAATGGATTGACGACAAGACGCTCGAACTCAAGCTGCGCCCGAACGTCAAGTTCCACAATGGCGATGTCATGACTGCCAAGGATGTCGTCTTCTCCTTCTCCGACGAGCGCTTCGGATTGCTGCCCGCGCAGATTGCTGCCCGCGACAAGGGCGAAACCACGTTTGCCCGCGCCGATGGTAGCAAGGGTATCGTACCCCCTGCGGCCGTCGCCGCCAGCCGCGCCTCCGAATGGCCATTGCTCGACCATGTCGAAGCCGTCGATGACCTTACCGTCCGTATCATCATGAAGAAGGCGACGCTTGACACGGAAGCCCGCCTCGCTCGCGTCAATTATGCCGGTGTCATCTCCAGGCGCGGCTTCATGGAAGCTGCCAGCTGGAACGCCTGGGCCGCTAAGCCAATCGCTACCGGCCCGTATAAGGTCGAAAAGCTGGACCCCGGCTCAGCAGTTCATATGGTCGCCAATGCCGACTATTGGGGCGGCAAGCCTCCGATCGATAAGCTCAACATTCTTGTCGTGCCGGAAGCGGCCAGCCGCGTCAACGGACTGATGTCCGGCGAATATGACATCATATCCGATGTCGGCCCTGATCAGGTGCCGATGATTGAGGGATCGTCCGATTACAAAGTGGTCGGCGGGCCGGTCGCCAATATTCGCTTCATCGCACTCGACGAAAACAATGGCCCCCTCAAGAACGTCAAGGTGCGTCAGGCGCTCAGCCACGCGATCGACCGCAAGACCATTGTGGAAGCGCTCTGGGGCGGTCGGACGGGAGTGCCGCAAGGCTTTCAGCATCCGCTGTTCAAGGATCTCTTCGCCACCGATCACCAGACCTCGGACTATGATCCTGAACTTGCAAAAAGGCTGCTTGCCGAATCCGGCTACAAGGGCGAACCGATCACCTATCGCGTCCACGATAACTACTATCCCAACGAACTGACAATCGCACAGTACAATCTCGAAAACCTGCGAGCCATCGGCTTCAATATCGATTTTTCCGTCATCGACAATCCCAACGATCCCGGTCCCGACCGAATGATGCAGGATCTCTCCAATACGGCCTATTTCGCCTTTCCGGCTGCACTTCTGGCCAACAACTGCCCGAACGGTGTCTACAACACCAAGACCAATCCGAAAGGCGGCATGTGGCAGAATGATGAGTTCGACCGCCTCTGCAACGTGATCAATGCCTCCACCGACCGTGCCGAGGTCAAGAAGGCCTTCTCCCGTGCCCTCGACATCATCGAGAACGAGGATCCCGGCATGATCGTTCTGCACCAGAACGCCATTCTCTACGGGAAGCGCGCAAACATCGAATGGGCGCCATCCGCGATGTTTGCGATGGATTTCACACCCGGCCATTTTGCGGTCAAAAACTAA
PROTEIN sequence
Length: 547
MHTTFKTFARAAVISSLFLGVASSAWARDTIINVAVQSMGTAGSIEINENNGTAARKFQNSVFEQLIALDLQDPNLAFKPGLASEWKWIDDKTLELKLRPNVKFHNGDVMTAKDVVFSFSDERFGLLPAQIAARDKGETTFARADGSKGIVPPAAVAASRASEWPLLDHVEAVDDLTVRIIMKKATLDTEARLARVNYAGVISRRGFMEAASWNAWAAKPIATGPYKVEKLDPGSAVHMVANADYWGGKPPIDKLNILVVPEAASRVNGLMSGEYDIISDVGPDQVPMIEGSSDYKVVGGPVANIRFIALDENNGPLKNVKVRQALSHAIDRKTIVEALWGGRTGVPQGFQHPLFKDLFATDHQTSDYDPELAKRLLAESGYKGEPITYRVHDNYYPNELTIAQYNLENLRAIGFNIDFSVIDNPNDPGPDRMMQDLSNTAYFAFPAALLANNCPNGVYNTKTNPKGGMWQNDEFDRLCNVINASTDRAEVKKAFSRALDIIENEDPGMIVLHQNAILYGKRANIEWAPSAMFAMDFTPGHFAVKN*