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SCNpilot_cont_500_bf_scaffold_124

Search features with annotation key words

Displaying items 1-30 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_124_1
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117..1103
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Methylocystis parvus RepID=UPI0002DB0F35
Uncharacterized protein {ECO:0000313|EMBL:KJC51024.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_124_2
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1772..2563
DNA (792bp) protein (264aa)
Short-chain dehydrogenase/reductase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUU3_RHITR rbh
short-chain dehydrogenase/reductase rbh
Short-chain dehydrogenase/reductase {ECO:0000313|EMBL:AGB75002.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_3
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2689..3342)
DNA (654bp) protein (218aa)
Putative anti-sigma factor, ChrR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPL1_RHITR rbh
putative anti-sigma factor, ChrR family rbh
Putative anti-sigma factor, ChrR family {ECO:0000313|EMBL:AGB73182.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_4
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3339..3917)
DNA (579bp) protein (193aa)
RNA polymerase sigma factor n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LR38_RHITR rbh
RNA polymerase sigma-24 subunit, ECF subfamily rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_5
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4134..4631
DNA (498bp) protein (166aa)
Putative tryptophan-rich sensory protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSS1_RHITR
putative tryptophan-rich sensory protein
Putative tryptophan-rich sensory protein {ECO:0000313|EMBL:AGB73180.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_6
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4647..5066)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSP6_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB73179.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_7
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5099..5530)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LP96_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB73178.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_8
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5499..6731)
DNA (1233bp) protein (411aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPK5_RHITR rbh
cfa5; cyclopropane-fatty-acyl-phospholipid synthase rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AGB73177.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6718..7551)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LR33_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB73176.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_10
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7548..8921)
DNA (1374bp) protein (458aa)
Putative amine oxidase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSR6_RHITR rbh
putative amine oxidase rbh
Putative amine oxidase {ECO:0000313|EMBL:AGB73175.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_11
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9096..9899
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LSP0_RHITR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB73174.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_12
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9902..10930
DNA (1029bp) protein (343aa)
Cyclopropane-fatty-acyl-phospholipid synthase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LP92_RHITR rbh
cfa4; cyclopropane-fatty-acyl-phospholipid synthase rbh
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:AGB73173.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_13
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10927..11448
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPK0_RHITR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB73172.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_14
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11610..12338)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Rhizobium phaseoli RepID=UPI0002F2485D
Uncharacterized protein {ECO:0000313|EMBL:KDP75656.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_124_15
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12448..13068
DNA (621bp) protein (207aa)
Transcriptional regulator protein n=2 Tax=Rhizobium/Agrobacterium group RepID=B9J6U6_AGRRK
TetR family transcriptional regulator {ECO:0000313|EMBL:KJF74124.1}; TaxID=1585697 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. KFB 330.;"
betI; transcriptional regulator protein
SCNpilot_cont_500_bf_scaffold_124_16
Ochrobactrum sp. EGD-AQ16, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13183..13497)
DNA (315bp) protein (105aa)
AraC family transcriptional regulator n=2 Tax=Ochrobactrum RepID=M5JL22_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:ERI16387.1}; TaxID=1390361 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum sp. EGD-AQ16.;"
AraC family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_124_17
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13649..14569)
DNA (921bp) protein (307aa)
Gluconolactonase n=1 Tax=Rhizobium freirei PRF 81 RepID=N6TYY7_9RHIZ rbh
Gluconolactonase {ECO:0000313|EMBL:ENN85594.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative gluconolactonase rbh
SCNpilot_cont_500_bf_scaffold_124_18
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14604..15554)
DNA (951bp) protein (317aa)
Putative permease component of ABC transporter n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U5R2_9RHIZ rbh
Putative permease component of ABC transporter {ECO:0000313|EMBL:ENN85593.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative amino acid ABC transporter, permease protein rbh
SCNpilot_cont_500_bf_scaffold_124_19
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15551..16495)
DNA (945bp) protein (315aa)
Putative amino acid ABC transporter, permease protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LXQ5_RHITR rbh
putative amino acid ABC transporter, permease protein rbh
Putative amino acid ABC transporter, permease protein {ECO:0000313|EMBL:AGB74944.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_20
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16492..17982)
DNA (1491bp) protein (497aa)
Sugar ABC transporter, ATP-binding protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6UXW4_9RHIZ rbh
Sugar ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ENN85591.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium freirei PRF 81.;"
putative amino acid ABC transporter, ATP-binding protein rbh
SCNpilot_cont_500_bf_scaffold_124_21
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18060..19076)
DNA (1017bp) protein (339aa)
Putative amino acid ABC transporter, substrate-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LW60_RHITR rbh
putative amino acid ABC transporter, substrate-binding protein rbh
Putative amino acid ABC transporter, substrate-binding protein {ECO:0000313|EMBL:AGB74946.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_22
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19375..20613
DNA (1239bp) protein (413aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUN7_RHITR rbh
GAF sensor signal transduction histidine kinase rbh
GAF sensor signal transduction histidine kinase {ECO:0000313|EMBL:AGB74947.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_23
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20610..21356
DNA (747bp) protein (249aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LUI2_RHITR rbh
two component transcriptional regulator, LuxR family rbh
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:AGB74948.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
SCNpilot_cont_500_bf_scaffold_124_24
Mesorhizobium huakuii, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21920..23023
DNA (1104bp) protein (368aa)
hypothetical protein n=1 Tax=Rhizobium loti RepID=UPI000372D8FD rbh
Dienelactone hydrolase {ECO:0000313|EMBL:AID34025.1}; TaxID=763057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium huakuii 7653R.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_124_25
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23031..23180)
DNA (150bp) protein (50aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;"
Shikimate kinase n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LN53_RHITR
shikimate kinase
SCNpilot_cont_500_bf_scaffold_124_26
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23180..23983)
DNA (804bp) protein (268aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89]
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906).;"
Signal peptidase I n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EK14_METSB
SCNpilot_cont_500_bf_scaffold_124_27
unknown

Not on your lists

24131..24589
DNA (459bp) protein (153aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_124_28
unknown

Not on your lists

24595..24768
DNA (174bp) protein (58aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_124_29
Rhizobium etli, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24918..25529)
DNA (612bp) protein (204aa)
aacC; aminoglycoside N3-acetyltransferase (EC:2.3.1.81); K00662 aminoglycoside N3'-acetyltransferase [EC:2.3.1.81]
Aminoglycoside N3'-acetyltransferase protein {ECO:0000313|EMBL:ACE90162.1}; EC=2.3.1.81 {ECO:0000313|EMBL:ACE90162.1};; TaxID=491916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium etli (strain CIAT 652).;"
Aminoglycoside N3'-acetyltransferase protein n=1 Tax=Rhizobium etli (strain CIAT 652) RepID=B3PSZ6_RHIE6
SCNpilot_cont_500_bf_scaffold_124_30
Rhizobium gallicum, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25619..27070)
DNA (1452bp) protein (484aa)
hypothetical protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B4CEF6 rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:AJD45368.1}; TaxID=1418105 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium gallicum bv. gallicum R602.;"
polysaccharide biosynthesis protein rbh
Displaying items 1-30 of 171 in total

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