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SCNpilot_cont_500_bf_scaffold_124_3

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(2689..3342)

Top 3 Functional Annotations

Value Algorithm Source
Putative anti-sigma factor, ChrR family n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LPL1_RHITR similarity UNIREF
DB: UNIREF100
  • Identity: 75.6
  • Coverage: 217.0
  • Bit_score: 333
  • Evalue 1.40e-88
  • rbh
putative anti-sigma factor, ChrR family similarity KEGG
DB: KEGG
  • Identity: 75.6
  • Coverage: 217.0
  • Bit_score: 333
  • Evalue 4.30e-89
  • rbh
Putative anti-sigma factor, ChrR family {ECO:0000313|EMBL:AGB73182.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium tropici CIAT 899.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 217.0
  • Bit_score: 333
  • Evalue 1.90e-88

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Taxonomy

Rhizobium tropici → Rhizobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 654
ATGACGATTAATCACCATCCCAGCGACCAAACACTCCTGCGCTTTGCCGCAGGCACGTTGCCTGCCGGTCCAGCACTCGTGGTCTCCACCCATCTGAGCGGCTGCCCGTTCTGTCAGAGGCGGCTGGCGGCCTTCGAGGCCGTCGGCGGCGATATCCTGACACGAACGCGACCCGAAGCCCTCTCGTCGGATGCTCTCGAGCGCACCCTTGCCCGTCTGGACTTGAGCCATCGGGTGACCGCCATCAGCCCTCGGCCGTCGCCACGCATATCCATCGACGGGCTCGCCCTTCCAAGCACATTGAACGATTGCAAAGTGGGTCCCTGGCGTACCGTCGGGGCGGGGGTCAAGCTCAGCCGCCTTGTCGTGCCGCATGCACCCGCAGCGAACGTCATCCTGCTGAAAGTAAAAGCGAACAAGCGCATGCCAGCGCATGGTCATACGGATCTGGAAGTGACGCAGGTTCTGAAAGGATCGTTCTCCGATGGCGATAATCGCTATCAGCCGGGAGACTTCGTCGAGGGCGATGACGAGACGGATCATAGCCCGGTCATAGGCAGCGAAGGCGAATGTATTTCGTTGGCGGCCATCGAAGGACATGTCCGGTTTCATGGCTTCCTCGGGAAGCTCATACAACCTTTTGTCCGCATCTGA
PROTEIN sequence
Length: 218
MTINHHPSDQTLLRFAAGTLPAGPALVVSTHLSGCPFCQRRLAAFEAVGGDILTRTRPEALSSDALERTLARLDLSHRVTAISPRPSPRISIDGLALPSTLNDCKVGPWRTVGAGVKLSRLVVPHAPAANVILLKVKANKRMPAHGHTDLEVTQVLKGSFSDGDNRYQPGDFVEGDDETDHSPVIGSEGECISLAAIEGHVRFHGFLGKLIQPFVRI*