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SCNpilot_cont_500_bf_scaffold_124_148

Organism: SCNPILOT_CONT_300_BF_Rhizobiales_59_19

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(143891..144811)

Top 3 Functional Annotations

Value Algorithm Source
Polysaccharide deacetylase n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JJH9_AGRRK similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 303.0
  • Bit_score: 464
  • Evalue 9.50e-128
  • rbh
Putative hydrolase {ECO:0000313|EMBL:GAJ93065.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Rhizobium rhizogenes NBRC 13257.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 303.0
  • Bit_score: 468
  • Evalue 9.30e-129
Polysaccharide deacetylase similarity KEGG
DB: KEGG
  • Identity: 73.6
  • Coverage: 303.0
  • Bit_score: 464
  • Evalue 3.00e-128
  • rbh

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Taxonomy

Agrobacterium rhizogenes → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 921
ATGGTCGAGGATCGAGCCCAGTCGACAAAGGGCTTTCCCCCCTTTCCACCTTACACGTGGCCGGAAGGAAAGCAGAGTGCCGTGCTGCTGAGTGTCGATGTCGACGCGGTCGCACCTTATCTGTGGGAGCATCGGGACGGTGTGCCGGATCGTCTCGCGCGGCTTGAGATCCGCCGTTTCGGATTGCGCTCAGGACTCGGTCGTATCCTCGGTCTGTTCGACCGCTACGGCGTGAAGGCAAGTTTCTATGTGCCGGCCGTGGTCGCGGAATTCGATCCCGATCTGCTGCCGGTTCTTCTTGCCGCCGGGCACGAGATCGGACTGCACGGCTATTTTCATGAGTTGGTTCGCGACATCCGAGCGGATGAGTTCAGCGCGGCTCTCGACGGCAGCCTCGAACTATTTAAACGGCAGACAGGACGATTACCGGTAGGGTTTCGCTCGCCGGCCTGGGAGATGACCCCGCACATGCTGGCTGAGATAAAGGCGCGGGGTCTTGCCTATGACTCCTCGCTGATGGGCTTTGACCACCCCTACGATATCGATGGCGTTGTCGAGATCCCGGTCCAGTGGGCCTTGGACGATGCAATCTTCTACAAGTTCGAGGGCAGTGGCAACGAGCGCTGGGCACCGGCTTCCGGTCGTGCCGTGCTGGAGGATTGGCTCGCCGAATGGCGGGCGCTCCACCGCTTTGGAGGGCTCTTCACCCTGACGGTTCATGACTGGATTTCCGGCAGGGCACAGCGCATCGCCGGGCTCGAAAAGCTGTTGGAAGCTATGACGGCCGAAACCGGCGCCTGGATCGCGACCGCGGCCGAAATTGCCGGTCATCACGCGTCATCGGTAAATTCCGGTCGGTTTTCCGTTGCCTCGGCCATTCCCTCTGCCATCGGCGCGCGGCGTTTCGGGGGAGAGCCATGA
PROTEIN sequence
Length: 307
MVEDRAQSTKGFPPFPPYTWPEGKQSAVLLSVDVDAVAPYLWEHRDGVPDRLARLEIRRFGLRSGLGRILGLFDRYGVKASFYVPAVVAEFDPDLLPVLLAAGHEIGLHGYFHELVRDIRADEFSAALDGSLELFKRQTGRLPVGFRSPAWEMTPHMLAEIKARGLAYDSSLMGFDHPYDIDGVVEIPVQWALDDAIFYKFEGSGNERWAPASGRAVLEDWLAEWRALHRFGGLFTLTVHDWISGRAQRIAGLEKLLEAMTAETGAWIATAAEIAGHHASSVNSGRFSVASAIPSAIGARRFGGEP*