name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_82_1
unknown
|
Not on your lists |
comp(23..220)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_82_2
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
303..533
|
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0I0N9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB05225.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
|
|
SCNpilot_cont_500_bf_scaffold_82_3
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(686..1342)
|
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FP34_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40122.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum molischianum DSM 120.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_82_4
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1401..1646
|
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L4D9_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AJD53581.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira xiamenensis M-5 = DSM 17429.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_82_trna_7
unknown
|
Not on your lists |
comp(2147..2220)
|
transferRNA
|
|
SCNpilot_cont_500_bf_scaffold_82_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2281..2766)
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B37F74
Uncharacterized protein {ECO:0000313|EMBL:GAO55979.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_82_6
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2773..3594)
|
nitrilase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B74240
rbh
Nitrilase {ECO:0000313|EMBL:EQB11974.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_82_7
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3596..3859)
|
glutaredoxin n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B78C33
Glutaredoxin {ECO:0000313|EMBL:EJU12332.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
glutaredoxin; K03676 glutaredoxin 3
|
|
SCNpilot_cont_500_bf_scaffold_82_8
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4025..4495
|
Heat shock protein Hsp20 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6S0_NOVAD
16 kDa heat shock protein A {ECO:0000313|EMBL:GAO55975.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
heat shock protein Hsp20; K04080 molecular chaperone IbpA
|
|
SCNpilot_cont_500_bf_scaffold_82_9
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4566..5549)
|
LuxR family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWG3_9SPHN
LuxR family transcriptional regulator {ECO:0000313|EMBL:EZP81792.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
LuxR family transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_82_10
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5791..6684
|
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y5N1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48431.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
alpha/beta hydrolase
|
|
SCNpilot_cont_500_bf_scaffold_82_11
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6688..7053)
|
feruloyl-CoA synthase n=1 Tax=Rhizobium RepID=UPI0003828650
Uncharacterized protein {ECO:0000313|EMBL:EJL58635.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. CF122.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_82_12
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7248..8270
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICP5_9SPHN
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCA90070.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_cont_500_bf_scaffold_82_13
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8287..9396
|
Bacterial capsule synthesis protein PGA_cap n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMJ4_9BURK
rbh
Bacterial capsule synthesis protein PGA_cap {ECO:0000313|EMBL:EIF31946.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
poly-gamma-glutamate biosynthesis protein; K07282 poly-gamma-glutamate synthesis protein (capsule biosynthesis protein)
|
|
SCNpilot_cont_500_bf_scaffold_82_14
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9690..12107
|
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028873C3
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAM01332.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_cont_500_bf_scaffold_82_15
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12230..12865)
|
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBFF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25079.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_500_bf_scaffold_82_16
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13181..14461
|
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8F1_9SPHN
rbh
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase
rbh
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AGH51238.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_500_bf_scaffold_82_17
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(14458..17583)
|
Cation/multidrug efflux pump acrB n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E734_9SPHN
rbh
Cation/multidrug efflux pump acrB {ECO:0000313|EMBL:EHJ62861.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
acrB; cation/multidrug efflux pump AcrB
rbh
|
|
SCNpilot_cont_500_bf_scaffold_82_18
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17588..18670)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E735_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EHJ62862.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
RND family efflux transporter
|
|
SCNpilot_cont_500_bf_scaffold_82_19
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18667..20118)
|
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0ISG5_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB14765.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium quisquiliarum P25.;"
RND efflux system outer membrane lipoprotein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_82_20
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20236..20931
|
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A647_9SPHN
Putative two-component response regulator {ECO:0000313|EMBL:GAD50213.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
two component transcriptional regulator, winged helix family
|
|
SCNpilot_cont_500_bf_scaffold_82_21
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20928..22214
|
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; Flags: Fragment;; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;"
Putative two-component histidine kinase (Fragment) n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXU3_9SPHN
rbh
cpxA; Sensor protein cpxA
|
|
SCNpilot_cont_500_bf_scaffold_82_22
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22341..23339
|
Poly (3-hydroxybutyrate) depolymerase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IFV0_BEII9
rbh
poly (3-hydroxybutyrate) depolymerase
rbh
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:ACB95689.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
|
|
SCNpilot_cont_500_bf_scaffold_82_trna_6
unknown
|
Not on your lists |
comp(23360..23433)
|
transferRNA
|
|
SCNpilot_cont_500_bf_scaffold_82_23
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23682..26495
|
TonB-dependent receptor n=1 Tax=Sphingobium indicum B90A RepID=I5BEH1_9SPHN
rbh
TonB-dependent receptor {ECO:0000313|EMBL:AJR24363.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
TonB-dependent receptor
rbh
|
|
SCNpilot_cont_500_bf_scaffold_82_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26586..27332
|
Conserved hypothetical integral membrane protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3C4_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:AKH42345.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein; K09125 hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_82_25
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27607..27810)
|
Phage shock protein C, PspC n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5E2_NOVAD
phage shock protein C, PspC
Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
|
|
SCNpilot_cont_500_bf_scaffold_82_26
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28002..29084
|
DNA replication and repair protein RecF n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZSV6_9SPHN
rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
DNA replication and repair protein RecF; K03629 DNA replication and repair protein RecF
rbh
|
|
SCNpilot_cont_500_bf_scaffold_82_27
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29138..29890)
|
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]
rbh
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ABD25872.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABD25872.1};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
3-oxoacyl-ACP synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B75872
rbh
|
|
SCNpilot_cont_500_bf_scaffold_82_28
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29894..30784)
|
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
[acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39); K00645 [acyl-carrier-protein] S-malonyltransferase [EC:2.3.1.39]
rbh
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F2_NOVAD
rbh
|