name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_121_1
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2124..2885)
|
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C8EA
Uncharacterized protein {ECO:0000313|EMBL:EQB04986.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
replication protein A
|
|
SCNpilot_cont_500_bf_scaffold_121_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3173..5479)
|
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000376C02A
TonB-dependent receptor {ECO:0000313|EMBL:GAO55581.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent receptor
|
|
SCNpilot_cont_500_bf_scaffold_121_3
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5753..7243)
|
Uncharacterized protein n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MM91_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:CCW16603.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_4
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7316..9322)
|
dethiobiotin synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B516E6
rbh
diguanylate cyclase/phosphodiesterase
rbh
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ACK83408.1}; TaxID=440085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain CM4 / NCIMB 13688); (Methylobacterium chloromethanicum).;"
|
|
SCNpilot_cont_500_bf_scaffold_121_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9519..11993)
|
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B551ED
TonB-dependent receptor {ECO:0000313|EMBL:GAO53433.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
TonB-dependent outer membrane receptor FecA5; K02014 iron complex outermembrane recepter protein
|
|
SCNpilot_cont_500_bf_scaffold_121_6
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12222..13601)
|
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDX8_9SPHN
rbh
Sensor histidine kinase {ECO:0000313|EMBL:GAO53431.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
sensory transduction histidine kinase
|
|
SCNpilot_cont_500_bf_scaffold_121_7
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13589..14275)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI0003609B5F
Sphingomonas taxi strain 30a NODE_19, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29681.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas taxi.;"
two component transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_121_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14442..15443
|
LacI family transcriptional regulator n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IN45_9SPHN
LacI family transcriptional regulator
LacI family transcriptional regulator {ECO:0000313|EMBL:BAK65493.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_cont_500_bf_scaffold_121_9
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15701..16324)
|
TadE-like protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7P8_9SPHN
TadE-like protein {ECO:0000313|EMBL:EHJ62541.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
TadE-like protein
|
|
SCNpilot_cont_500_bf_scaffold_121_10
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16321..16908)
|
TadE-like n=2 Tax=Novosphingobium RepID=F6INE4_9SPHN
Pilus assembly protein TadE {ECO:0000313|EMBL:KHK92036.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
TadE-like protein
|
|
SCNpilot_cont_500_bf_scaffold_121_11
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16908..18824)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5D8_NOVAD
rbh
Flp pilus assembly protein TadG {ECO:0000313|EMBL:KHS45621.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_12
unknown
|
Not on your lists |
19104..19475
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_121_13
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19611..20813)
|
membrane protein n=2 Tax=Caulobacter RepID=UPI0003688C50
rbh
Putative esterase of the alpha-beta hydrolase superfamily {ECO:0000313|EMBL:EJL30669.1}; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein; K07001 NTE family protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_14
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20870..22354)
|
Major facilitator transporter n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INE6_9SPHN
rbh
major facilitator superfamily transporter
rbh
Major facilitator transporter {ECO:0000313|EMBL:CCA92948.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_cont_500_bf_scaffold_121_15
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22551..23585)
|
LacI family transcriptional regulator n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IM88_9SPHN
rbh
LacI family transcriptional regulator {ECO:0000313|EMBL:EQB12885.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosutens DS20.;"
LacI family transcriptional regulator
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_16
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23825..26617
|
outer membrane insertion C-terminal signal n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5D6A4
rbh
TonB-dependent receptor {ECO:0000313|EMBL:EJK82751.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
outer membrane insertion C-terminal signal
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_17
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26690..28210
|
tryptophan halogenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2E953
rbh
Tryptophan halogenase {ECO:0000313|EMBL:EZP56977.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. RIT328.;"
tryptophan halogenase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_18
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28225..30006
|
UPI0003D5F14D related cluster n=1 Tax=unknown RepID=UPI0003D5F14D
rbh
Alpha-amylase {ECO:0000313|EMBL:ETI63183.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
alpha amylase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_19
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
30019..31623
|
Alpha-amylase family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAZ8_9SPHN
rbh
Alpha-amylase family protein {ECO:0000313|EMBL:EGD58224.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
|
|
SCNpilot_cont_500_bf_scaffold_121_20
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
31653..33701
|
Alpha-glucosidase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAZ9_9SPHN
rbh
Alpha-glucosidase {ECO:0000313|EMBL:EGD58223.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
|
|
SCNpilot_cont_500_bf_scaffold_121_21
R_Brevundimonas_68_13, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33748..34824
|
pyridoxal-5'-phosphate-dependent protein subunit beta; K01738 cysteine synthase A [EC:2.5.1.47]
cysteine synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B74A5A
rbh
Tax=RIFCSPHIGHO2_12_FULL_Brevundimonas_68_13_curated
|
|
SCNpilot_cont_500_bf_scaffold_121_22
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34859..36865
|
Oligopeptidase A {ECO:0000313|EMBL:CCW16390.1}; EC=3.4.24.70 {ECO:0000313|EMBL:CCW16390.1};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002D860EA
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_23
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
36931..37944
|
FMN-dependent alpha-hydroxy acid dehydrogenase; K00104 glycolate oxidase [EC:1.1.3.15]
FMN-dependent alpha-hydroxy acid dehydrogenase n=1 Tax=Paracoccus denitrificans (strain Pd 1222) RepID=A1BB43_PARDP
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
|
|
SCNpilot_cont_500_bf_scaffold_121_24
Thauera sp. 63, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
37946..38629
|
PKHD-type hydroxylase C664_18854 {ECO:0000256|HAMAP-Rule:MF_00657}; EC=1.14.11.- {ECO:0000256|HAMAP-Rule:MF_00657};; TaxID=497321 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 63.;"
putative hydroxylase; K07336 PKHD-type hydroxylase [EC:1.14.11.-]
PKHD-type hydroxylase C664_18854 n=1 Tax=Thauera sp. 63 RepID=N6WZP4_9RHOO
|
|
SCNpilot_cont_500_bf_scaffold_121_25
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
38649..39290
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZB26_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD58107.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_121_26
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
39390..40559
|
hypothetical protein n=1 Tax=Kordiimonas gwangyangensis RepID=UPI00037973E1
rbh
Uncharacterized protein {ECO:0000313|EMBL:KHS42958.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_27
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
40670..42610
|
potassium transporter Kup n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B30529
rbh
K+ potassium transporter; K03549 KUP system potassium uptake protein
rbh
Probable potassium transport system protein kup 2 {ECO:0000255|HAMAP-Rule:MF_01522}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_500_bf_scaffold_121_28
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
42629..44026
|
periplasmic sensor signal transduction histidine kinase; K07646 two-component system, OmpR family, sensor histidine kinase KdpD [EC:2.7.13.3]
rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
Periplasmic sensor signal transduction histidine kinase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G871_NOVAD
rbh
|
|
SCNpilot_cont_500_bf_scaffold_121_29
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
44023..44697
|
Fis family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI00039A8A76
two component transcriptional regulator; K07667 two-component system, OmpR family, KDP operon response regulator KdpE
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABD25951.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_500_bf_scaffold_121_30
Pseudomonas sp. GM24, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
44750..46777
|
Putative acyltransferase n=2 Tax=Pseudomonas RepID=J2YW79_9PSED
rbh
Putative acyltransferase {ECO:0000313|EMBL:EJM45073.1}; TaxID=1144326 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM24.;"
o-antigen acetylase
|