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SCNpilot_cont_500_bf_scaffold_290

Search features with annotation key words

Displaying items 1-30 of 82 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_290_1
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1946
DNA (1944bp) protein (648aa)
TraG domain-containing protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8U1_9SPHN
TraG domain-containing protein {ECO:0000313|EMBL:EGD59316.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
TraG domain-containing protein
SCNpilot_cont_500_bf_scaffold_290_2
unknown

Not on your lists

comp(1968..2195)
DNA (228bp) protein (76aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_290_3
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2670..3917)
DNA (1248bp) protein (416aa)
Reverse transcriptase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S350_9SPHN rbh
Reverse transcriptase rbh
Reverse transcriptase {ECO:0000313|EMBL:AGH50196.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
SCNpilot_cont_500_bf_scaffold_290_4
unknown

Not on your lists

4085..4456
DNA (372bp) protein (124aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_290_5
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4401..5066)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B429B0
Uncharacterized protein {ECO:0000313|EMBL:AIB13200.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_290_6
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5050..5655)
DNA (606bp) protein (202aa)
7-cyano-7-deazaguanine synthase {ECO:0000256|SAAS:SAAS00029421}; EC=6.3.4.20 {ECO:0000256|SAAS:SAAS00029421};; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
ExsB family protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B51C80
hypothetical protein; K06920 queuosine biosynthesis protein QueC
SCNpilot_cont_500_bf_scaffold_290_7
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5640..6830)
DNA (1191bp) protein (397aa)
nucleoside 2-deoxyribosyltransferase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B3A805 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN54417.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_290_8
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6827..7138)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B51BF2
Uncharacterized protein {ECO:0000313|EMBL:GAN54418.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
SCNpilot_cont_500_bf_scaffold_290_9
Tanticharoenia sakaeratensis, Tanticharoenia, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7249..8082)
DNA (834bp) protein (278aa)
Thermostable 8-oxoguanine DNA glycosylase n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B4012B rbh
Uncharacterized protein {ECO:0000313|EMBL:GAN54419.1}; TaxID=1231623 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Tanticharoenia.;" source="Tanticharoenia sakaeratensis NBRC 103193.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_290_10
unknown

Not on your lists

8117..8425
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B359F0
SCNpilot_cont_500_bf_scaffold_290_11
Halomonas sp. HAL1, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8579..9490)
DNA (912bp) protein (304aa)
Putative uncharacterized protein n=1 Tax=Halomonas sp. HAL1 RepID=G4FAL1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EHA14152.1}; TaxID=550984 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. HAL1.;"
SCNpilot_cont_500_bf_scaffold_290_12
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9756..10247)
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI000360FF1F
GCN5-like N-acetyltransferase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
SCNpilot_cont_500_bf_scaffold_290_13
Sphingobium baderi, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10244..10537)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Sphingobium baderi LL03 RepID=T0GBR9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQA97477.1}; TaxID=1114964 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium baderi LL03.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_290_14
Pseudomonas taiwanensis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10950..11720
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Pseudomonas taiwanensis SJ9 RepID=V7D9M2_9PSED
Uncharacterized protein {ECO:0000313|EMBL:ESW38378.1}; TaxID=1388762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas taiwanensis SJ9.;"
SCNpilot_cont_500_bf_scaffold_290_15
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11816..13252
DNA (1437bp) protein (479aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI0002632237 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIZ79382.1}; Flags: Fragment;; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_290_16
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13433..16396)
DNA (2964bp) protein (988aa)
Conjugative relaxase domain protein, TrwC/TraI family n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZTZ6_9SPHN rbh
ATPase AAA {ECO:0000313|EMBL:KHL24295.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
conjugative relaxase region-like protein
SCNpilot_cont_500_bf_scaffold_290_17
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16401..18869)
DNA (2469bp) protein (823aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4M1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60432.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_290_18
unknown

Not on your lists

comp(18853..19152)
DNA (300bp) protein (100aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_290_19
unknown

Not on your lists

comp(20030..20176)
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_290_20
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20289..21902)
DNA (1614bp) protein (538aa)
agropinic acid lactamase; K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002EBF912
Methylhydantoinase {ECO:0000313|EMBL:KJB95675.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aerolata KACC 11604.;"
SCNpilot_cont_500_bf_scaffold_290_21
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21899..23953)
DNA (2055bp) protein (685aa)
agaF; AgaF protein; K01473 N-methylhydantoinase A [EC:3.5.2.14]
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI000364EBCD
Methylhydantoinase {ECO:0000313|EMBL:EWY41005.1}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
SCNpilot_cont_500_bf_scaffold_290_22
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23975..24820)
DNA (846bp) protein (282aa)
Ketodeoxygluconokinase {ECO:0000313|EMBL:KFC70945.1}; EC=2.7.1.45 {ECO:0000313|EMBL:KFC70945.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
fructoselysine kinase; K10710 fructoselysine 6-kinase [EC:2.7.1.-]
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00037A223D
SCNpilot_cont_500_bf_scaffold_290_23
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24845..25858)
DNA (1014bp) protein (338aa)
Glutamine--fructose-6-phosphate aminotransferase {ECO:0000313|EMBL:KFC70946.1}; EC=2.6.1.16 {ECO:0000313|EMBL:KFC70946.1};; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000369DD3D
sugar isomerase
SCNpilot_cont_500_bf_scaffold_290_24
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26023..26856
DNA (834bp) protein (278aa)
Transcriptional regulator n=1 Tax=Rhizobium sp. CF080 RepID=J2JSM0_9RHIZ
GntR family transcriptional regulator {ECO:0000313|EMBL:KFC70947.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_290_25
Gluconacetobacter sp. SXCC-1, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27075..29471
DNA (2397bp) protein (799aa)
TonB-dependent receptor n=1 Tax=Gluconacetobacter sp. SXCC-1 RepID=F3S9W5_9PROT rbh
TonB-dependent receptor {ECO:0000313|EMBL:EGG76594.1}; TaxID=1004836 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter.;" source="Gluconacetobacter sp. SXCC-1.;"
TonB-dependent receptor rbh
SCNpilot_cont_500_bf_scaffold_290_26
unknown

Not on your lists

29726..30007
DNA (282bp) protein (94aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_290_27
Streptomyces sp. HPH0547, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30011..31318
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Streptomyces sp. HPH0547 RepID=S3AUR4_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD91926.1}; TaxID=1203592 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. HPH0547.;"
general substrate transporter; K03762 MFS transporter, MHS family, proline/betaine transporter
SCNpilot_cont_500_bf_scaffold_290_28
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31366..32172
DNA (807bp) protein (269aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00216361};; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondromyces apiculatus DSM 436.;"
shikimate/quinate 5-dehydrogenase id=18316450 bin=Nanosalinarum tax=Nanosalinarum
shikimate/quinate 5-dehydrogenase
SCNpilot_cont_500_bf_scaffold_290_29
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32905..33318)
DNA (414bp) protein (138aa)
lactoylglutathione lyase; K01759 lactoylglutathione lyase [EC:4.4.1.5]
Lactoylglutathione lyase n=1 Tax=Rhizobium sp. CF142 RepID=J2KTT1_9RHIZ
Glyoxalase {ECO:0000313|EMBL:KKC26493.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
SCNpilot_cont_500_bf_scaffold_290_30
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33352..34659)
DNA (1308bp) protein (436aa)
L-fucose:H+ symporter permease n=1 Tax=Caulobacter sp. AP07 RepID=J3AUG6_9CAUL
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EJL38151.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
fucP; Fucose permease
Displaying items 1-30 of 82 in total

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