name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_858_1
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(515..784)
|
hypothetical protein n=1 Tax=Methylobacterium sp. 88A RepID=UPI0003752CD6
Transposase {ECO:0000313|EMBL:EZP64485.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
transposase
|
|
SCNpilot_cont_500_bf_scaffold_858_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(844..1272)
|
Uncharacterized protein n=1 Tax=Sphingobium lactosutens DS20 RepID=T0IP81_9SPHN
Transposase {ECO:0000313|EMBL:EZP65385.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
transposase
|
|
SCNpilot_cont_500_bf_scaffold_858_3
Halomonas anticariensis, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1310..2101)
|
Dienelactone hydrolase n=1 Tax=Halomonas anticariensis FP35 = DSM 16096 RepID=S2KS48_9GAMM
Dienelactone hydrolase {ECO:0000313|EMBL:EPC03328.1}; TaxID=1121939 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas anticariensis FP35 = DSM 16096.;"
dienelactone hydrolase
|
|
SCNpilot_cont_500_bf_scaffold_858_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2113..2667)
|
GCN5-related N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J3K5_RHOP2
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABD04955.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
|
|
SCNpilot_cont_500_bf_scaffold_858_5
Shewanella sp. ANA-3, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2707..3312)
|
GCN5-related N-acetyltransferase n=1 Tax=Shewanella sp. (strain ANA-3) RepID=A0KVK3_SHESA
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABK47822.1}; TaxID=94122 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella sp. (strain ANA-3).;"
|
|
SCNpilot_cont_500_bf_scaffold_858_6
Mastigocladus laminosus, Mastigocladus, Stigonematales, Cyanobacteria, Bacteria
|
Not on your lists |
comp(3668..3952)
|
Uncharacterized protein {ECO:0000313|EMBL:KIY14618.1}; TaxID=1594576 species="Bacteria; Cyanobacteria; Stigonematales; Mastigocladus.;" source="Mastigocladus laminosus UU774.;"
|
|
SCNpilot_cont_500_bf_scaffold_858_7
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3924..6437)
|
Putative DNA ligase {ECO:0000313|EMBL:BAK65104.1}; EC=6.5.1.1 {ECO:0000313|EMBL:BAK65104.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
DNA ligase D n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B54C86
rbh
|
|
SCNpilot_cont_500_bf_scaffold_858_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6439..7296)
|
Ku family containing protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B46C2E
rbh
Ku protein; K10979 DNA end-binding protein Ku
rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. SYK-6.;"
|
|
SCNpilot_cont_500_bf_scaffold_858_9
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7413..7598
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLP4_CAUST
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ADG11417.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
|
|
SCNpilot_cont_500_bf_scaffold_858_10
Brevundimonas sp. EAKA, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7549..8451)
|
LysR family transcriptional regulator (EC:4.2.1.1)
rbh
LysR family transcriptional regulator n=1 Tax=Rhizobium loti RepID=UPI000374390A
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KDP93476.1}; TaxID=1495854 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. EAKA.;"
|
|
SCNpilot_cont_500_bf_scaffold_858_11
Agrobacterium fabrum, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8559..9581
|
Zinc-binding oxidoreductase n=1 Tax=Agrobacterium tumefaciens (strain C58 / ATCC 33970) RepID=A9CLD1_AGRT5
rbh
zinc-binding oxidoreductase
rbh
Zinc-binding oxidoreductase {ECO:0000313|EMBL:AAK90698.2}; TaxID=176299 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium fabrum (strain C58 / ATCC 33970) (Agrobacterium; tumefaciens (strain C58)).;"
|
|
SCNpilot_cont_500_bf_scaffold_858_12
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9578..9994
|
Uncharacterized protein n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T5L2_CAUSK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABZ69570.1}; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
|
|
SCNpilot_cont_500_bf_scaffold_858_13
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10176..10400
|
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0I5X2_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KCZ56962.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringensis.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_858_14
Brevundimonas sp. BAL3, Brevundimonas, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10397..11167
|
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974};; Peptidase M {ECO:0000256|HAMAP-Rule:MF_01974}; TaxID=391600 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas sp. BAL3.;"
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18]
Methionine aminopeptidase n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WE25_9CAUL
rbh
|
|
SCNpilot_cont_500_bf_scaffold_858_15
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11186..12412)
|
NAD(P)H-nitrite reductase n=1 Tax=Novosphingobium sp. AP12 RepID=J2GPC2_9SPHN
NAD(P)H-nitrite reductase {ECO:0000313|EMBL:EZP76589.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
|
|
SCNpilot_cont_500_bf_scaffold_858_16
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12479..13861)
|
Putative transcriptional regulatory protein (GntR family, N-term) with a PLP-dependent aminotransferase domain (C-term) n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AXK1_AZOBR
putative transcriptional regulatory protein (GntR family, N-term) with a PLP-dependent aminotransferase domain (C-term)
Putative transcriptional regulatory protein (GntR family, N-term) with a PLP-dependent aminotransferase domain (C-term) {ECO:0000313|EMBL:CCD02610.1}; TaxID=1064539 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense Sp245.;"
|
|
SCNpilot_cont_500_bf_scaffold_858_17
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13965..14825
|
EamA-like transporter family n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YEJ6_9BRAD
Transporter {ECO:0000313|EMBL:KFL32669.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_858_18
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15094..15558)
|
Heat shock protein DnaJ-like protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C526_9SPHN
Heat shock protein DnaJ-like protein {ECO:0000313|EMBL:EIZ78912.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
molecular chaperone DnaJ
|
|
SCNpilot_cont_500_bf_scaffold_858_19
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15957..16499)
|
Peptidoglycan-associated protein n=2 Tax=Novosphingobium RepID=F6IJX9_9SPHN
peptidoglycan-associated protein; K03640 peptidoglycan-associated lipoprotein
Peptidoglycan-associated protein {ECO:0000313|EMBL:EHJ62014.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium pentaromativorans US6-1.;"
|
|
SCNpilot_cont_500_bf_scaffold_858_20
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16569..17969)
|
Protein TolB n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J1Q7_9SPHN
rbh
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
translocation protein TolB; K03641 TolB protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_858_21
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17966..18976)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBX5_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD57949.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_858_22
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18981..19445)
|
Biopolymer transport protein ExbD/TolR n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WFE0_9SPHN
Biopolymer transport protein ExbD/TolR {ECO:0000313|EMBL:EIZ78908.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
biopolymer transport protein ExbD/TolR; K03560 biopolymer transport protein TolR
|
|
SCNpilot_cont_500_bf_scaffold_858_23
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19449..20156)
|
Cell division and transport-associated protein TolQ n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9L4_NOVAD
rbh
MotA/TolQ/ExbB proton channel; K03562 biopolymer transport protein TolQ
rbh
Cell division and transport-associated protein TolQ {ECO:0000313|EMBL:ABD25459.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_500_bf_scaffold_858_24
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20153..20689)
|
Acyl-CoA thioester hydrolase YbgC {ECO:0000313|EMBL:AKH44087.1}; EC=3.1.2.- {ECO:0000313|EMBL:AKH44087.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
thioesterase; K07107 acyl-CoA thioester hydrolase [EC:3.1.2.-]
Predicted thioesterase n=1 Tax=Erythrobacter litoralis (strain HTCC2594) RepID=Q2N8J2_ERYLH
|
|
SCNpilot_cont_500_bf_scaffold_858_25
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20754..21131)
|
HIT-like protein {ECO:0000313|EMBL:AKH44086.1}; EC=3.-.-.- {ECO:0000313|EMBL:AKH44086.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00035E9176
histidine triad (HIT) protein
|
|
SCNpilot_cont_500_bf_scaffold_858_26
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21135..21473)
|
Phosphoribosyl-ATP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071052}; Short=PRA-PH {ECO:0000256|HAMAP-Rule:MF_01020};; EC=3.6.1.31 {ECO:0000256|HAMAP-Rule:MF_01020, ECO:0000256|SAAS:SAAS00071044};; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. AP49.;"
hisE; phosphoribosyl-ATP pyrophosphohydrolase (EC:3.6.1.31); K01523 phosphoribosyl-ATP pyrophosphohydrolase [EC:3.6.1.31]
Phosphoribosyl-ATP pyrophosphatase n=1 Tax=Sphingobium sp. AP49 RepID=J2L5C4_9SPHN
|
|
SCNpilot_cont_500_bf_scaffold_858_27
unknown
|
Not on your lists |
comp(21526..21723)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_858_28
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21855..22619)
|
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; ImGP synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Novosphingobium sp. AP12 RepID=J2PA19_9SPHN
rbh
|
|
SCNpilot_cont_500_bf_scaffold_858_29
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22864..23592)
|
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC:5.3.1.16); K01814 phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase [EC:5.3.1.16]
rbh
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZZ91_9SPHN
rbh
|
|
SCNpilot_cont_500_bf_scaffold_858_30
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23594..24214)
|
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-); K02501 glutamine amidotransferase [EC:2.4.2.-]
rbh
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YB29_9SPHN
rbh
|