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SCNpilot_cont_500_bf_scaffold_12_26

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 29566..30462

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MG36_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 62.0
  • Coverage: 292.0
  • Bit_score: 344
  • Evalue 1.40e-91
  • rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CCW15704.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 292.0
  • Bit_score: 344
  • Evalue 2.00e-91
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 60.8
  • Coverage: 293.0
  • Bit_score: 326
  • Evalue 9.50e-87
  • rbh

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Taxonomy

Sphingobium japonicum → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGATCGACCCGCGCGCCCTGCGCACCTTTCACGAAGTTTGCCGCGCGGGCTCGATCACGGGCGCGGCGCGCGCGCTCAACATTTCCCAACCCTCGGTGTCCAGCGCCATCGCCTTGCTCGAGGCGCGGCTGGGCGCGACCCTGTTTGAACGGACCCGCGCGGGCATCGTGCTGACGGCGGCGGGCCATGCTTTGCAGGCGCGCGCGCAAATGCTCGAACATCTGCTGCGCGATGCCCAGGCCGAGGTGACAGCCGCCGCCGAGGGCTTGTCCGGCCCCCTGCGCATCGGCGGCACGCCGGGCGCCTTGGTAAGCCTGCTGCCTCTGGCCATGGCGCGTTTCGAGGACAGCCTATCGCACATCACGCTGAGCGTGCTGGAGCGCGCCGACCGCGAATTGACCGCCATGCTGCGCGAGGGCGATATCGAGGTGGCTTTCGTCACCACCGCGATGGAGGAGCCGGACGAGGATATTGCCGAGCGCACGCTGGCGCGCGATCCCTTTGCGCTGATTGTCGGGCCGGATGGAGGCGATTGGCCCAGCCCCTTTTCGCTGAAACAGGCTGACCGGCTGCGCTGGGTTTTGCCTGAGGCGCAGGGCGCGTTCCGGCGTCAGGTCGATGCGCTGTTCGCCGCCGCCGGGGTGCCTGTGCCGCGCGATGCGATCCGCTGCGATTCCCTGCTGACCACCAAGGCGCTGGTGCGCGATTGCCGCCGCGTAACGATCCTGCCCATGCGGGTGGCCGCCAGCGAACTGTCGATGGGCGTGCTGCGCGCCCTGCCGATTGCCGAGGCGGCGTTTGAGCGCAGTGTGGGCGTGCGCTGGCTGAAGCAGCGCGGCATGTCGCCTTTGGCGGGCGCTTTGATCCGGCAGCTTGAGGGCGAAACCATAGTCTAA
PROTEIN sequence
Length: 299
MIDPRALRTFHEVCRAGSITGAARALNISQPSVSSAIALLEARLGATLFERTRAGIVLTAAGHALQARAQMLEHLLRDAQAEVTAAAEGLSGPLRIGGTPGALVSLLPLAMARFEDSLSHITLSVLERADRELTAMLREGDIEVAFVTTAMEEPDEDIAERTLARDPFALIVGPDGGDWPSPFSLKQADRLRWVLPEAQGAFRRQVDALFAAAGVPVPRDAIRCDSLLTTKALVRDCRRVTILPMRVAASELSMGVLRALPIAEAAFERSVGVRWLKQRGMSPLAGALIRQLEGETIV*