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SCNpilot_cont_500_bf_scaffold_102_28

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 35575..36693

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.7
  • Coverage: 372.0
  • Bit_score: 648
  • Evalue 4.60e-183
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7] similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 375.0
  • Bit_score: 638
  • Evalue 1.40e-180
  • rbh
DNA polymerase III subunit beta n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J2P7_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 88.7
  • Coverage: 372.0
  • Bit_score: 648
  • Evalue 3.30e-183
  • rbh

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Taxonomy

Novosphingobium lindaniclasticum → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGAAAGCCACGATCGAACGCGCGACCTTGCTGCGTTGTTTGAGCCATGTGCAATCGGTGGTGGAACGGCGCAATACCATCCCCATCCTTTCCAACGTGCTGATCGAGGCCAGCGGCACCGGTTCGGTCCGCCTGATGGCCACCGACCTTGATCTTCAGGTCGTCGAGCATCTGCCCGCCGTCAGCGTCGAGGCGCCCGGTGCGATCACGGTTTCGGCGCATCTGCTGTTCGACATCGCGCGCAAGCTGCCCGATGGGGCGCAGGTCTCGCTTCAGACCGCCGACAACCGCCTTGTGATCAAGGCCGGGCGCAGCCGGTTCCAACTGCCGACCCTGCCGCGTGACGATTTCCCCGTCATCATCGAGGGCGATCTGCCCACCAGCTTTGAGGTGCCCGCCGCCACGCTGGCGCAATTGATCGACCGCACGCGCTTTGCCATCAGCACCGAGGAAACGCGTTACTATCTCAACGGCATTTTCCTCCATGTCTCCGAGGAAGAACTGAAGGCGGCCGCCACCGATGGCCACCGTCTGGCACGCTTTACGCTGGCCAAGCCGGAAGGCGCGGACGGCATGCCCGACGTCATCGTGCCGCGCAAATGCGTGGGCGAATTGCGCAAGCTGCTCGACGAACATGCGGACAGCAACGTCAGCATCGACCTGTCGGCCAGCAAGATCCGTTTCTCGCTGGGCGGGGAAGAGGGCGTGGTGCTGACCAGCAAGCTGATCGACGGCACGTTCCCCGATTACAATCGCGTGATCCCGACCGGCAATGACAAGCTGCTGCGTCTGGACCCCAAGAGCTTCTATGAGGCGGTGGACCGCGTGGCCACGATCGCTACGGAAAAGACCCGCGCGGTGAAAATGGCGCTGGAAACCGACCGCGTGACGCTCTCGGTGACTTCGCCGGACAATGGCACGGCGGCTGAAGAACTGCCCGCCGATTACGGTTCGACCGGGTTCGAGATTGGTTTTAACGCGACCTATCTGAAAGACATCCTGAACCAGATCGATGGCGACAATGTCGAACTCCATCTGGCCGATGCCGGCGCGCCGACCCTGATCCGTCAGAGCGACAAGAGCCCCGCGCTCTATGTGCTGATGCCGATGCGGGTGTGA
PROTEIN sequence
Length: 373
MKATIERATLLRCLSHVQSVVERRNTIPILSNVLIEASGTGSVRLMATDLDLQVVEHLPAVSVEAPGAITVSAHLLFDIARKLPDGAQVSLQTADNRLVIKAGRSRFQLPTLPRDDFPVIIEGDLPTSFEVPAATLAQLIDRTRFAISTEETRYYLNGIFLHVSEEELKAAATDGHRLARFTLAKPEGADGMPDVIVPRKCVGELRKLLDEHADSNVSIDLSASKIRFSLGGEEGVVLTSKLIDGTFPDYNRVIPTGNDKLLRLDPKSFYEAVDRVATIATEKTRAVKMALETDRVTLSVTSPDNGTAAEELPADYGSTGFEIGFNATYLKDILNQIDGDNVELHLADAGAPTLIRQSDKSPALYVLMPMRV*