name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_102_1
RLO_Sphingomonadales_63_15, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(407..1630)
|
integrase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6880B
rbh
symbiosis island integrase
rbh
Tax=RIFCSPLOWO2_12_FULL_Sphingomonadales_63_15_curated
|
|
SCNpilot_cont_500_bf_scaffold_102_trna_2
unknown
|
Not on your lists |
comp(1821..1892)
|
transferRNA
|
|
SCNpilot_cont_500_bf_scaffold_102_2
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1933..2802)
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4E5DF
rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO53986.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_102_3
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2799..4124)
|
Recombination factor protein RarA n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZB30_9SPHN
rbh
Recombination factor protein RarA {ECO:0000313|EMBL:EGD58103.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
recombination factor protein RarA; K07478 putative ATPase
|
|
SCNpilot_cont_500_bf_scaffold_102_4
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4415..5599)
|
Glycosyl transferase, group 1 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZB28_9SPHN
rbh
Glycosyl transferase family 1 {ECO:0000313|EMBL:KHK92747.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysiense.;"
group 1 glycosyl transferase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_102_5
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(5840..6280)
|
hypothetical protein n=1 Tax=Sphingomonas melonis RepID=UPI000361073D
Uncharacterized protein {ECO:0000313|EMBL:GAO54820.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. MD-1.;"
|
|
SCNpilot_cont_500_bf_scaffold_102_6
Sphingomonas sp. SKA58, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7644..9470)
|
GTP-binding protein TypA n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NFC8_9SPHN
rbh
GTP-binding protein TypA {ECO:0000313|EMBL:EAT09583.1}; TaxID=314266 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. (strain SKA58).;"
GTP-binding protein TypA; K06207 GTP-binding protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_102_7
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9806..12481
|
TonB-dependent receptor n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WB38_9SPHN
rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIZ77366.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
TonB-dependent receptor
rbh
|
|
SCNpilot_cont_500_bf_scaffold_102_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12617..13084
|
Putative uncharacterized protein n=2 Tax=Novosphingobium RepID=F6IIE4_9SPHN
Inner membrane protein YhaI {ECO:0000313|EMBL:KHS43177.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_102_9
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13084..13500
|
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B564A3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25594.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_500_bf_scaffold_102_10
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(13509..16010)
|
ABC transporter permease n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EE09_9SPHN
ABC transporter permease {ECO:0000313|EMBL:KHL26406.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
ABC transporter permease; K02004 putative ABC transport system permease protein
|
|
SCNpilot_cont_500_bf_scaffold_102_11
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16007..16798)
|
ABC transporter n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQZ7_9SPHN
rbh
ABC transporter {ECO:0000313|EMBL:EZP73856.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
ABC transporter; K02003 putative ABC transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_102_12
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16831..17499
|
Putative acyl-CoA thioesterase I protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C0T8_9SPHN
Putative acyl-CoA thioesterase I protein {ECO:0000313|EMBL:EIZ77362.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
putative acyl-CoA thioesterase I protein
|
|
SCNpilot_cont_500_bf_scaffold_102_13
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17580..18443
|
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI00036B54E5
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACA20193.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
|
|
SCNpilot_cont_500_bf_scaffold_102_14
GWF1_Sphingomonadales_63_6_curated, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18669..20948
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002E18628
rbh
hypothetical protein
Tax=GWF1_Sphingomonadales_63_6_curated
|
|
SCNpilot_cont_500_bf_scaffold_102_15
Trichodesmium erythraeum, Trichodesmium, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria
|
Not on your lists |
21041..21778
|
hypothetical protein n=1 Tax=Pleurocapsa sp. PCC 7319 RepID=UPI00034DE5FD
glycosyl transferase family protein
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABG53424.1}; TaxID=203124 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Trichodesmium.;" source="Trichodesmium erythraeum (strain IMS101).;"
|
|
SCNpilot_cont_500_bf_scaffold_102_16
unknown
|
Not on your lists |
21797..22213
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_102_17
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22547..23368
|
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002D30E45
WcbD {ECO:0000313|EMBL:EQA97219.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
putative capsule polysaccharide export inner-membrane protein; K10107 capsular polysaccharide transport system permease protein
|
|
SCNpilot_cont_500_bf_scaffold_102_18
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23371..24153
|
Putative capsule polysaccharide export inner-membrane protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S603_9SPHN
putative capsule polysaccharide export inner-membrane protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_500_bf_scaffold_102_19
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24150..24797
|
ATP-binding protein n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6F959
rbh
putative capsule polysaccharide export ATP-binding protein
rbh
Putative capsule polysaccharide export ATP-binding protein {ECO:0000313|EMBL:AGH49935.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. MM-1.;"
|
|
SCNpilot_cont_500_bf_scaffold_102_20
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24804..26573)
|
Glycosyl transferase, family 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAE7_NOVAD
rbh
glycosyl transferase
rbh
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ABD25176.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_500_bf_scaffold_102_21
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(26567..27562)
|
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAE6_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25177.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
|
|
SCNpilot_cont_500_bf_scaffold_102_22
Chelativorans sp. BNC1, Chelativorans, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27547..28467)
|
Capsule polysaccharide biosynthesis n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11EP3_MESSB
rbh
capsule polysaccharide biosynthesis; K07266 capsular polysaccharide export protein
rbh
Capsule polysaccharide biosynthesis {ECO:0000313|EMBL:ABG64132.1}; TaxID=266779 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Chelativorans.;" source="Chelativorans sp. (strain BNC1).;"
|
|
SCNpilot_cont_500_bf_scaffold_102_23
Sphingobium sp. Ant17, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28469..29539
|
capsule polysaccharide transporter n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5C39F
rbh
Capsule biosynthesis protein {ECO:0000313|EMBL:EXS68685.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;"
putative capsule polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein
|
|
SCNpilot_cont_500_bf_scaffold_102_24
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(30387..31748)
|
capsular polysaccharide biosynthesis protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630826
rbh
Putative capsule polysaccharide export protein {ECO:0000313|EMBL:EIZ78493.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
putative capsule polysaccharide export protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_102_25
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
32202..33311
|
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
rbh
Mannose-1-phosphate guanylyltransferase (Fragment) n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C7M3_9SPHN
rbh
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:EIZ79435.1}; Flags: Fragment;; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;"
|
|
SCNpilot_cont_500_bf_scaffold_102_26
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
33322..34161
|
Mannose-6-phosphate isomerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J9L1_9SPHN
rbh
Mannose-6-phosphate isomerase {ECO:0000313|EMBL:KHL24444.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
|
|
SCNpilot_cont_500_bf_scaffold_102_27
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
34210..35262
|
KpsF/GutQ family protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDE4_SPHWW
rbh
ScaffoldA20, whole genome shotgun sequence {ECO:0000313|EMBL:KIS29583.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
|
|
SCNpilot_cont_500_bf_scaffold_102_28
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
35575..36693
|
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
DNA polymerase III subunit beta (EC:2.7.7.7); K02338 DNA polymerase III subunit beta [EC:2.7.7.7]
rbh
DNA polymerase III subunit beta n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0J2P7_9SPHN
rbh
|
|
SCNpilot_cont_500_bf_scaffold_102_29
unknown
|
Not on your lists |
36833..37504
|
Putative Membrane protein n=1 Tax=Vibrio nigripulchritudo SFn118 RepID=U4GB96_9VIBR
|