ggKbase home page

SCNpilot_cont_500_bf_scaffold_102_24

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(30387..31748)

Top 3 Functional Annotations

Value Algorithm Source
capsular polysaccharide biosynthesis protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630826 similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 407.0
  • Bit_score: 474
  • Evalue 1.40e-130
  • rbh
Putative capsule polysaccharide export protein {ECO:0000313|EMBL:EIZ78493.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. Rr 2-17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.0
  • Coverage: 413.0
  • Bit_score: 464
  • Evalue 1.50e-127
putative capsule polysaccharide export protein similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 406.0
  • Bit_score: 447
  • Evalue 5.60e-123
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. Rr 2-17 → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1362
ATGCAGGATCTCGGCGTCTTCCGCCTCATCGCCCCGGCCGGACCTGATACTGCCTCTTGGCGCGGAGCGGCGCCGGGGCTGCAGCCGACGCCCCTACCAGCGGAGATCAGATGGGCGCGCCCGGTCCTGCCCATGCCCGCTCCGGTCCGGCGCTTCCTGTTTTTGCAAGGCCCTCCCGGCACCTTCTTTTTTCAACTGGCCCAAACTCTTGCTCAGAAGGGTCAGGAAGTGCGCCGCATCAATCTGAACGGCGGCGATGAGCATGACTGGCCCGGCCCGGTCGCCGATCGTTCCGGCACGCATCGCGCCTCCCCTTATCGCGGCACCCAGGAAGGCTGGCCGCTGTTCATCGACCGCTATTTGCGCCGCAGCGGTATAACCGATCTGGTGCTCTTCGGCGATTGCAGGTCAATGCATATGACGGCCCATCAGATGGCGCGCCTGAACGGTGTGCGGGTCCATGTGTTCGAGGAAGGCTATATCCGTCCGAATTGGCTGACGCTGGAGCGCGAAGGTGTCAATGGCCACTCCCCCCTGCCGCACAGACCGCAGGACATATTGGCCGCCGCGCGCGGATTGCCCGGCCCCGCGCCCATGCCGCCCATCGGCGCCTCGCTGGGGCGGCGGGCGCGCGACACATGGGGCTATTTCGGCCATATGCTGCTGGGCGCGGTGACGCTGCGCTATCCCTTCTATCGCTCGCATCGGCCCGGCTCGATCGTCATGGAGGGGCTGGGCTGGATCGCCAAATATCTGATGCGTGGGCGTCAAGCGGCCAAGGCAGAAGTGACGTTGGAGCGACTGGAAGGACGTAGCTATTTCCTCTTTCCGCTGCAACTCTCATCCGATTACCAGATCCGCGTTCACTCCCCCTTTTCCTCGATGCGTCAGGCCGCCGATTATGTGCTGGCCAGCTTTGCCGCCCACGCCCCGCACGAAACCAGCCTTGTCATCAAGGAGCACCCGCTCGATGCCACGCTGGGCGGATGGGGGGCCTATGTGCGCGACCGGGCGCGGGCGCTGGGGCTGGGTGATCGGCTGATCCATCTGGCGGGCGGCGATTTGAACACGCTGGCGCAGGGCGCGCGGGCGATGGTCGTGGTCAATTCCACCTCGGCTACCTTTGCCTTGGCAGGCGGCATCCCGGTCAAGGCGCTGGGCCGCGCGGTCTATGCCATTCCCGGCATCACCGATGAGCAACCGCTGGCGCAATTCTGGGCCGCCCCCATGCCGCCCGATGAAGCGCTCTATGACGCCTTCTGCCGCGTGCTGCACCGCCATTGCCTTGTGCGCGGCGGACTGGCCAGCGAATCAGCCACGCGGATCCTGATCGCCAATGCGGTGGAGCGGTTGGTGGGGTGA
PROTEIN sequence
Length: 454
MQDLGVFRLIAPAGPDTASWRGAAPGLQPTPLPAEIRWARPVLPMPAPVRRFLFLQGPPGTFFFQLAQTLAQKGQEVRRINLNGGDEHDWPGPVADRSGTHRASPYRGTQEGWPLFIDRYLRRSGITDLVLFGDCRSMHMTAHQMARLNGVRVHVFEEGYIRPNWLTLEREGVNGHSPLPHRPQDILAAARGLPGPAPMPPIGASLGRRARDTWGYFGHMLLGAVTLRYPFYRSHRPGSIVMEGLGWIAKYLMRGRQAAKAEVTLERLEGRSYFLFPLQLSSDYQIRVHSPFSSMRQAADYVLASFAAHAPHETSLVIKEHPLDATLGGWGAYVRDRARALGLGDRLIHLAGGDLNTLAQGARAMVVVNSTSATFALAGGIPVKALGRAVYAIPGITDEQPLAQFWAAPMPPDEALYDAFCRVLHRHCLVRGGLASESATRILIANAVERLVG*