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SCNpilot_cont_500_bf_scaffold_102_23

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 28469..29539

Top 3 Functional Annotations

Value Algorithm Source
capsule polysaccharide transporter n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B5C39F similarity UNIREF
DB: UNIREF100
  • Identity: 55.8
  • Coverage: 364.0
  • Bit_score: 393
  • Evalue 2.40e-106
  • rbh
Capsule biosynthesis protein {ECO:0000313|EMBL:EXS68685.1}; TaxID=1461752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. Ant17.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.9
  • Coverage: 362.0
  • Bit_score: 384
  • Evalue 1.60e-103
putative capsule polysaccharide export outer membrane protein; K01991 polysaccharide export outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 368.0
  • Bit_score: 363
  • Evalue 1.10e-97

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Taxonomy

Sphingobium sp. Ant17 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1071
ATGCTGGGCGCCTGCGCGACCCTGCCGGTCAGCGGGCCGACCGGGGGGCAGGTGATGGCGCCGCAGGCCGGGCCGAATTTTCGCATTGTCGCGGTGGATTCGCTGGCCGCCTTGCCGGTGGCCCCGGTTCTGAGCGGTCCGGCGGCGGGGGAGGATGATGGCGCGGCCGCGCCCATCGACATGATCGGGCCGGGCGATATGCTCGATATCCAGATCTATGAGGCGGGCGTCAGCCTGTTTGCGAGCACGCGCCCCATCGCGGCGGCGGGCGGCAATGGCGCGGCGCAGGCTGAGCGCCTGCCCGCGATGCGCGTGGATGACAAAGGGCAGATTTTTGTGCCCTTTGTCGGGCGGATGCGCGCGGGTGGGCTGACATCGACGCAACTGGCCCATGCGATCCGGGCCGAATTGAAGGATCTGTCGCAAAATCCGCAGGTGGTGGTGGGCATCGCCCAATCGGTGACCAACAGCGTCATTCTGGGCGGTGAAGTGGCGCGGCCCGGTCGGCTGGTGCTGACCACGAACCGGGAAACCCTGCCCGAGGTGATCGCTCTGTCGGGGGGCTATCGGGGGGAGGCCAAGGATCTGGCGGTGCAGGTGACGCGCGGGGCGCAATTGCGCGAATTCCGTTTGGCCGATGCCGTGCAGGGCGCGGCGCGCGACTGGCGCATCCGCCCCGGCGATCAGATCGAACTGATCAAAAAACCGCAGACCTTTGCCGTGCTGGGCGCGGCGGGGCGGGTGGAGCAACTGCCCTTTGCCGCCCCTTCGGTCAGTTTGGCCGAGGCGCTGTCGGCGGCGGGAGGGCCGAACCCCAATCTTGGCGATGCCAAGGCGGTGTTCATCTTCCGCTTTGACGCAGGGGACGCGCCCACCGTCTATCACATCAACATGATGAACCCCGGCAGCGTCTTTCTGGCCCAGCGCTTTGCCATGCGCGACAAGGACGTGCTCTATATCGGCAATGCCGCCGCCAATCAGCCGGGCAAGTTGATCCAGTTGTTCAGCCAGTTGTTCAGCCCGATCATTGCTGTGCAGGGGGCTTTGGTGAACACCGGGGTGGTGAGGTAG
PROTEIN sequence
Length: 357
MLGACATLPVSGPTGGQVMAPQAGPNFRIVAVDSLAALPVAPVLSGPAAGEDDGAAAPIDMIGPGDMLDIQIYEAGVSLFASTRPIAAAGGNGAAQAERLPAMRVDDKGQIFVPFVGRMRAGGLTSTQLAHAIRAELKDLSQNPQVVVGIAQSVTNSVILGGEVARPGRLVLTTNRETLPEVIALSGGYRGEAKDLAVQVTRGAQLREFRLADAVQGAARDWRIRPGDQIELIKKPQTFAVLGAAGRVEQLPFAAPSVSLAEALSAAGGPNPNLGDAKAVFIFRFDAGDAPTVYHINMMNPGSVFLAQRFAMRDKDVLYIGNAAANQPGKLIQLFSQLFSPIIAVQGALVNTGVVR*