ggKbase home page

SCNpilot_cont_500_bf_scaffold_391_28

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: 26938..27354

Top 3 Functional Annotations

Value Algorithm Source
CopG family transcriptional regulator n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000361792D similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 137.0
  • Bit_score: 212
  • Evalue 3.00e-52
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32925.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.0
  • Coverage: 128.0
  • Bit_score: 216
  • Evalue 2.90e-53
Helix-turn-helix protein, CopG similarity KEGG
DB: KEGG
  • Identity: 64.5
  • Coverage: 124.0
  • Bit_score: 163
  • Evalue 4.90e-38

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Novosphingobium sp. P6W → Novosphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGGTTGAGAAGATCCGCCATCAGCTGTTCCTGCCGAAACCGGTAAGCGACCGCCTTGAGGCGCTGGCTGCCAAGCCAGGCGCGTCGAAATCGGCAATCCTGACCGATGCGGTCACCGCCTGGCTCAATCGGCGCGGAGCATCGGAACTGGAAGACCGCTTCGGCATCCGTCTCGATCGCCTGACCACGGCCATTGGACGGCTTGAGCGCGACGGGCATATCCAGCTCGAAACGCTGGCACTGTTCATCCGCTACGAACTGGCGATCCAAGCCCCGCTCGCCGAGAACGATCATGCGGGCCGGGCTATCGCCGCCAAGCGGTTCGAGGCCTTCATCACCCAGGTCGGGCGGCAGATCGCCGCTGGACGGCGAACGATTGCCGACGGGTTCGGCGGCGCGGCGGAGAACGGTCGATGA
PROTEIN sequence
Length: 139
MVEKIRHQLFLPKPVSDRLEALAAKPGASKSAILTDAVTAWLNRRGASELEDRFGIRLDRLTTAIGRLERDGHIQLETLALFIRYELAIQAPLAENDHAGRAIAAKRFEAFITQVGRQIAAGRRTIADGFGGAAENGR*