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SCNpilot_cont_500_bf_scaffold_391

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_391_1
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

414..662
DNA (249bp) protein (83aa)
Translation initiation factor IF-1 n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB47_9SPHN
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1
SCNpilot_cont_500_bf_scaffold_391_2
unknown

Not on your lists

708..860
DNA (153bp) protein (51aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_391_3
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1330..1539
DNA (210bp) protein (70aa)
Cold shock protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5PB45_9SPHN
Cold shock protein {ECO:0000313|EMBL:EDL48793.1}; TaxID=161528 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp. SD-21.;"
cold shock protein; K03704 cold shock protein (beta-ribbon, CspA family)
SCNpilot_cont_500_bf_scaffold_391_4
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1619..1831
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:AKH44055.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobacter atlanticus.;"
SCNpilot_cont_500_bf_scaffold_391_5
Sphingopyxis fribergensis, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1828..2085
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5D774
Uncharacterized protein {ECO:0000313|EMBL:AJA09481.1}; TaxID=1515612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis fribergensis.;"
SCNpilot_cont_500_bf_scaffold_391_6
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2263..2520)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z3Y8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60688.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_391_7
unknown

Not on your lists

2743..3108
DNA (366bp) protein (122aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_391_8
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2956..3651)
DNA (696bp) protein (232aa)
Spermidine synthase n=1 Tax=Novosphingobium sp. AP12 RepID=J2PGN0_9SPHN
Scaffold1, whole genome shotgun sequence {ECO:0000313|EMBL:KIS34542.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_391_9
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4725..4946
DNA (222bp) protein (74aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCS4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57608.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCNpilot_cont_500_bf_scaffold_391_10
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5094..5852)
DNA (759bp) protein (253aa)
Transglutaminase domain-containing protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDY3_9SPHN rbh
Transglutaminase domain-containing protein {ECO:0000313|EMBL:EGD57180.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
transglutaminase
SCNpilot_cont_500_bf_scaffold_391_11
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6003..8201)
DNA (2199bp) protein (733aa)
Glycosyl transferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCR9_9SPHN rbh
Glycosyl transferase {ECO:0000313|EMBL:EGD57603.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
glycosyl transferase family protein rbh
SCNpilot_cont_500_bf_scaffold_391_12
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8301..8471)
DNA (171bp) protein (57aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZCS0_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57604.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
SCNpilot_cont_500_bf_scaffold_391_13
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9185..10375)
DNA (1191bp) protein (397aa)
Putative beta-lactamase n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I5J7_AZOC5
beta-lactamase
Putative beta-lactamase {ECO:0000313|EMBL:BAF88287.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_391_14
Azorhizobium caulinodans, Azorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10558..11052
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) RepID=A8I5J4_AZOC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAF88286.1}; TaxID=438753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium.;" source="Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 /; NBRC 14845 / NCIMB 13405 / ORS 571).;"
SCNpilot_cont_500_bf_scaffold_391_15
Mesorhizobium ciceri, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11065..11295
DNA (231bp) protein (77aa)
Helix-turn-helix domain protein n=1 Tax=Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 / WSM1271) RepID=E8TLI5_MESCW
helix-turn-helix domain-containing protein; K07727 putative transcriptional regulator
Helix-turn-helix domain protein {ECO:0000313|EMBL:ADV12736.1}; TaxID=765698 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium ciceri bv. biserrulae (strain HAMBI 2942 / LMG 23838 /; WSM1271).;"
SCNpilot_cont_500_bf_scaffold_391_16
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12184..13194
DNA (1011bp) protein (337aa)
Putative uncharacterized protein n=1 Tax=Azospirillum amazonense Y2 RepID=G1XWH2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGY02412.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitrospirillum amazonense Y2.;"
SCNpilot_cont_500_bf_scaffold_391_17
unknown

Not on your lists

13747..15393
DNA (1647bp) protein (549aa)
hypothetical protein n=1 Tax=Caulobacter sp. JGI 0001010-J14 RepID=UPI00036DA15B
SCNpilot_cont_500_bf_scaffold_391_18
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15390..16277
DNA (888bp) protein (296aa)
Cysteine protease n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KUH2_SOLCM
cysteine protease
Cysteine protease {ECO:0000313|EMBL:AFD07337.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 /; NCIMB 12057 / USAM 9D) (Flexibacter canadensis).;"
SCNpilot_cont_500_bf_scaffold_391_19
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16274..16717)
DNA (444bp) protein (148aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM02827.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas parapaucimobilis NBRC 15100.;"
SCNpilot_cont_500_bf_scaffold_391_20
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16714..17001)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002D33055
Nuclease SbcCD subunit D {ECO:0000313|EMBL:AJR24383.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
nuclease SbcCD subunit D
SCNpilot_cont_500_bf_scaffold_391_21
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17476..19068)
DNA (1593bp) protein (531aa)
hypothetical protein n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C6A32
Nuclease of the RecB family-like protein {ECO:0000313|EMBL:EFC84027.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
SCNpilot_cont_500_bf_scaffold_391_22
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19794..21233
DNA (1440bp) protein (480aa)
deoxyguanosinetriphosphate triphosphohydrolase-like protein; K01129 dGTPase [EC:3.1.5.1] rbh
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA77766.2}; EC=3.1.5.1 {ECO:0000313|EMBL:ABA77766.2};; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
Deoxyguanosinetriphosphate triphosphohydrolase-like protein n=2 Tax=Rhodobacter sphaeroides RepID=Q3J618_RHOS4 rbh
SCNpilot_cont_500_bf_scaffold_391_23
Rhodobacter sphaeroides, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21233..22018
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) RepID=Q3J617_RHOS4
hypothetical protein
Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequence {ECO:0000313|EMBL:ABA77767.1}; TaxID=272943 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM; 158).;"
SCNpilot_cont_500_bf_scaffold_391_24
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22514..22963
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4I6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD60596.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_391_25
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23071..23904
DNA (834bp) protein (278aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z4I4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD60594.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_391_26
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23972..24331)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI00037302FE
Uncharacterized protein {ECO:0000313|EMBL:EGD60593.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_391_27
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24884..26935
DNA (2052bp) protein (684aa)
Conjugal transfer coupling protein TraG n=1 Tax=Sphingopyxis sp. MC1 RepID=N9W5H9_9SPHN
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:ENY82802.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4
SCNpilot_cont_500_bf_scaffold_391_28
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26938..27354
DNA (417bp) protein (139aa)
CopG family transcriptional regulator n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000361792D
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32925.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
Helix-turn-helix protein, CopG
SCNpilot_cont_500_bf_scaffold_391_29
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27351..28340
DNA (990bp) protein (330aa)
conjugal transfer protein TrbB n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248AEC6
Conjugal transfer protein TrbB {ECO:0000313|EMBL:ENY82800.1}; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. MC1.;"
conjugal transfer protein TrbB; K03196 type IV secretion system protein VirB11
SCNpilot_cont_500_bf_scaffold_391_30
BJP_08E140C01_10KDA_Sphingopyxis_64_55, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28343..28678
DNA (336bp) protein (112aa)
conjugal transfer protein TrbC n=1 Tax=alpha proteobacterium LLX12A RepID=UPI000366C078
conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
Tax=BJP_08E140C01_10KDA_Sphingopyxis_64_55
Displaying items 1-30 of 98 in total

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