ggKbase home page

SCNpilot_cont_500_bf_scaffold_898_12

Organism: SCNPILOT_CONT_300_BF_Novosphingobium_63_714

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 11 / 38
Location: comp(6829..7659)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.4
  • Coverage: 276.0
  • Bit_score: 511
  • Evalue 6.60e-142
protein involved in catabolism of external DNA n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036E6301 similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 276.0
  • Bit_score: 506
  • Evalue 2.00e-140
  • rbh
hypothetical protein; K07115 similarity KEGG
DB: KEGG
  • Identity: 85.9
  • Coverage: 276.0
  • Bit_score: 497
  • Evalue 3.80e-138
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sphingopyxis sp. LC81 → Sphingopyxis → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 831
ATGAATTATCGCCATTCCTTCCATGCCGGCAATAGCGCCGATGTTGTGAAGCACAGCCTGCTGATCGCCCTCGTGCGGGCCTTGCAGCAAAAAGAAGGCGGGCTGACCCTGATCGACACCCATGCCGGCTGCGGGCTGTACGACCTTCAGGGAGATCAGGCTCAGCGCACCGGCGAGTCCACGCAGGGCGTGATGCGGGCCTTTGCCGACACGAACCCGTTGCTCGACGACTACCGCGCCGCCGTACGGGCGGTGAATGTCGGGGACGAGCCGCGTCTCTACCCCGGCTCGCCCCGGTTTCTGGCGCAACTTCTGCGCCCGCAGGATCTCCTGATCCTCAACGAAAAACATCCCGAAGACGCCTATGCCCTGCGCGGCGTGATGCGCGACACCCAAGCCGCCGTGCACGAACGCGACGCTTACGAGCTTTGGCTGGCGATGGTGCCGCCCCGAACGTCCCGCGGCGTGGTGGTGGTCGACCCGCCGTATGAGCAGACGGACGAACGCGCCCGTATCACGGCTACTCTGGCCGCCGCTCACCGCAAATGGGCGCATGGCGTGACGGTGATCTGGTATCCGCTGAAGGAGCGCCCCACCCATGCGCAGTGGAAGCACAAGTTGCGCAGGCTGGGCATTCCGAAATTTCTGAGCGTGGAGCATTGGCTGTACGACAGCGATCAGCCCGGCATCTATAACGGCGCGGGCCTTTTCATCGTCAACCCGCCCTACGCCTTCACGCAGGCGCTGTCGCCTATGCTGGAAGCCCTGCGCGCCGCGCTGGCGCCGGAGGGGCATAAGGGCCAGATCACAGCCGACTGGCTGGGCGATTAA
PROTEIN sequence
Length: 277
MNYRHSFHAGNSADVVKHSLLIALVRALQQKEGGLTLIDTHAGCGLYDLQGDQAQRTGESTQGVMRAFADTNPLLDDYRAAVRAVNVGDEPRLYPGSPRFLAQLLRPQDLLILNEKHPEDAYALRGVMRDTQAAVHERDAYELWLAMVPPRTSRGVVVVDPPYEQTDERARITATLAAAHRKWAHGVTVIWYPLKERPTHAQWKHKLRRLGIPKFLSVEHWLYDSDQPGIYNGAGLFIVNPPYAFTQALSPMLEALRAALAPEGHKGQITADWLGD*