name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_898_1
Sphingomonas sp. SRS2, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..226)
|
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
DNA helicase n=1 Tax=Sandarakinorhabdus sp. AAP62 RepID=UPI000313835D
DNA helicase {ECO:0000313|EMBL:KKC27099.1}; TaxID=133190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. SRS2.;"
|
|
SCNpilot_cont_500_bf_scaffold_898_2
Sphingobium yanoikuyae, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(219..584)
|
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EB91_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KEZ12872.1}; TaxID=13690 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium yanoikuyae (Sphingomonas yanoikuyae).;"
|
|
SCNpilot_cont_500_bf_scaffold_898_3
unknown
|
Not on your lists |
comp(763..972)
|
Uncharacterized protein {ECO:0000313|EMBL:CPR22105.1}; TaxID=1578971 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Filomicrobium.;" source="Filomicrobium sp. Y.;"
|
|
SCNpilot_cont_500_bf_scaffold_898_4
unknown
|
Not on your lists |
comp(1059..1658)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_898_5
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1713..2189)
|
hypothetical protein n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262C349
Uncharacterized protein {ECO:0000313|EMBL:EZP70746.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Pseudomonas paucimobilis).;"
|
|
SCNpilot_cont_500_bf_scaffold_898_6
unknown
|
Not on your lists |
comp(2285..2722)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_898_7
unknown
|
Not on your lists |
comp(2722..3150)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_898_8
unknown
|
Not on your lists |
comp(3143..3406)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_898_9
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3490..3882)
|
Uncharacterized protein family UPF0150 n=1 Tax=Sphingobium chlorophenolicum L-1 RepID=F6F2U5_SPHCR
CopG family transcriptional regulator {ECO:0000313|EMBL:AJP72942.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_898_10
RHI_Sphingopyxis_65_19, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(4143..5519)
|
integrase n=1 Tax=Sphingobium yanoikuyae RepID=UPI000262BCE4
rbh
integrase family protein
rbh
Tax=RIFCSPHIGHO2_12_FULL_Sphingopyxis_65_19_curated
|
|
SCNpilot_cont_500_bf_scaffold_898_11
unknown
|
Not on your lists |
comp(6181..6468)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_898_12
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6829..7659)
|
Ribosomal RNA large subunit methyltransferase J {ECO:0000256|HAMAP-Rule:MF_00934}; EC=2.1.1.266 {ECO:0000256|HAMAP-Rule:MF_00934};; 23S rRNA (adenine(2030)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; 23S rRNA m6A2030 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00934}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
protein involved in catabolism of external DNA n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036E6301
rbh
hypothetical protein; K07115
rbh
|
|
SCNpilot_cont_500_bf_scaffold_898_13
unknown
|
Not on your lists |
comp(7917..9104)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_898_14
Burkholderia thailandensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
9387..10397
|
CysB family transcriptional regulator n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003A58CA9
rbh
transcriptional regulator CysB-like protein; K13635 LysR family transcriptional regulator, cys regulon transcriptional activator
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:AIP24768.1}; Cys regulon transcriptional activator {ECO:0000313|EMBL:ABC39046.1}; TaxID=271848 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 /; CIP 106301).;"
|
|
SCNpilot_cont_500_bf_scaffold_898_15
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10394..11365)
|
Serine O-acetyltransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDI4_9SPHN
rbh
Serine O-acetyltransferase {ECO:0000313|EMBL:EGD57275.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
|
|
SCNpilot_cont_500_bf_scaffold_898_16
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(11757..13838)
|
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HXN1_9SPHN
rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB16833.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindaniclasticum LE124.;"
|
|
SCNpilot_cont_500_bf_scaffold_898_17
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14214..16604
|
TonB-dependent receptor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MM77_9SPHN
TonB-dependent receptor {ECO:0000313|EMBL:CCW18300.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
outer membrane receptor (OMR) family protein
|
|
SCNpilot_cont_500_bf_scaffold_898_18
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16604..18097
|
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GWS0_9SPHN
rbh
Scaffold8, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31732.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_898_19
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18126..19445
|
MFS transporter n=1 Tax=Sphingobium ummariense RL-3 RepID=T0ILM7_9SPHN
rbh
MFS transporter {ECO:0000313|EMBL:EQB29720.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
major facilitator superfamily protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_898_20
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19446..20489)
|
Sal operon transcriptional repressor n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNK0_9SPHN
rbh
Sal operon transcriptional repressor {ECO:0000313|EMBL:CCW18299.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
LacI-family transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_898_21
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20694..21740
|
UPI0003D618F8 related cluster n=1 Tax=unknown RepID=UPI0003D618F8
rbh
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:ETI64245.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
|
|
SCNpilot_cont_500_bf_scaffold_898_22
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21742..22437
|
UPI0003D6705C related cluster n=1 Tax=unknown RepID=UPI0003D6705C
rbh
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ETI64246.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
fumarylacetoacetate (FAA) hydrolase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_898_23
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22430..23056
|
maleylacetoacetate isomerase; K01800 maleylacetoacetate isomerase [EC:5.2.1.2]
UPI0003D6950D related cluster n=1 Tax=unknown RepID=UPI0003D6950D
Maleylacetoacetate isomerase {ECO:0000313|EMBL:ETI64247.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
|
|
SCNpilot_cont_500_bf_scaffold_898_24
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23074..24678
|
Sulfatase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICG5_9SPHN
rbh
sulfatase
rbh
Sulfatase {ECO:0000313|EMBL:CCA89990.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. PP1Y.;"
|
|
SCNpilot_cont_500_bf_scaffold_898_25
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(24715..26493)
|
Scaffold15, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31002.1}; EC=4.2.1.9 {ECO:0000313|EMBL:KIS31002.1};; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. P6W.;"
Dihydroxyacid dehydratase/phosphogluconate dehydratase n=1 Tax=Novosphingobium sp. AP12 RepID=J2FXU7_9SPHN
rbh
|
|
SCNpilot_cont_500_bf_scaffold_898_26
Sphingobium sp. C100, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26759..27889
|
fumarylacetoacetate hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B62DF4
rbh
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:ETI64347.1}; TaxID=1207055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. C100.;"
fumarylacetoacetate hydrolase family protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_898_27
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27886..28662
|
3-oxoacyl-ACP reductase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6E147
rbh
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EQA99232.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. HDIP04.;"
SDR-family protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_898_28
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28662..29519
|
gluconolaconase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5F125
rbh
Gluconolaconase {ECO:0000313|EMBL:EQB31839.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
putative gluconolactonase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_898_29
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29540..30952
|
major facilitator transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B44DD0
rbh
D-xylose proton-symporter XylE {ECO:0000313|EMBL:CCW19377.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
sugar transporter
|
|
SCNpilot_cont_500_bf_scaffold_898_30
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(31011..31088)
|
bifunctional D-altronate/D-mannonate dehydratase n=1 Tax=Sphingomonas elodea RepID=UPI0002630AC2
mandelate racemase/muconate lactonizing protein; K08323 starvation sensing protein RspA
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EZP81131.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium resinovorum.;"
|