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SCNpilot_cont_500_bf_scaffold_44

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Displaying items 1-30 of 1189 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_44_1
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115..1428)
DNA (1314bp) protein (438aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
beta-glucosidase; K05350 beta-glucosidase [EC:3.2.1.21] rbh
Beta-glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB5_PELHB rbh
SCNpilot_cont_500_bf_scaffold_44_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1505..1942)
DNA (438bp) protein (146aa)
GCN5-related N-acetyltransferase n=1 Tax=Stenotrophomonas maltophilia JV3 RepID=G0JWP3_STEMA
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEM52139.1}; TaxID=868597 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia JV3.;"
SCNpilot_cont_500_bf_scaffold_44_3
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1945..3027)
DNA (1083bp) protein (361aa)
Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP-like protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB4_PELHB
Scaffold protein for [4Fe-4S] cluster assembly Apb C, MRP-like {ECO:0000313|EMBL:CDP52761.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
Scaffold protein for (4Fe-4S) cluster assembly ApbC, MRP-like protein; K03593 ATP-binding protein involved in chromosome partitioning
SCNpilot_cont_500_bf_scaffold_44_4
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3034..3687)
DNA (654bp) protein (218aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2]
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
Probable transaldolase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB3_PELHB
SCNpilot_cont_500_bf_scaffold_44_5
unknown

Not on your lists

3956..4102
DNA (147bp) protein (49aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_44_6
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4093..4326)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IFB5_XANP2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABS66708.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_44_7
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4355..5539)
DNA (1185bp) protein (395aa)
Aspartate aminotransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAB2_PELHB
Aromatic amino acid aminotransferase {ECO:0000313|EMBL:KKC33219.1}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
aspartate aminotransferase
SCNpilot_cont_500_bf_scaffold_44_8
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5669..6841
DNA (1173bp) protein (391aa)
N-acetyl-L,L-diaminopimelate deacetylase; K01451 hippurate hydrolase [EC:3.5.1.32]
Amidohydrolase n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CDQ5_9RHOB
Amidohydrolase {ECO:0000313|EMBL:KKB06706.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_500_bf_scaffold_44_9
unknown

Not on your lists

6838..7134
DNA (297bp) protein (99aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_44_10
unknown

Not on your lists

7298..7606
DNA (309bp) protein (103aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_44_11
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7784..9439)
DNA (1656bp) protein (552aa)
Maltodextrin glucosidase {ECO:0000313|EMBL:CDP52751.1}; EC=3.2.1.20 {ECO:0000313|EMBL:CDP52751.1};; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
maltodextrin glucosidase; K01187 alpha-glucosidase [EC:3.2.1.20]
Maltodextrin glucosidase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAA4_PELHB
SCNpilot_cont_500_bf_scaffold_44_12
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10138..10626
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M0_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL28048.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_44_13
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10626..11918
DNA (1293bp) protein (431aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
histidinol dehydrogenase; K00013 histidinol dehydrogenase [EC:1.1.1.23] rbh
Histidinol dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M1_PELHB rbh
SCNpilot_cont_500_bf_scaffold_44_14
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11920..12903
DNA (984bp) protein (328aa)
Arsenate reductase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M2_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:CDP53345.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
arsenate reductase rbh
SCNpilot_cont_500_bf_scaffold_44_15
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12907..13545
DNA (639bp) protein (213aa)
Maf-like protein KKY_404 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA88_PELHB rbh
Maf-like protein JP74_04390 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
septum formation protein Maf; K06287 septum formation protein rbh
SCNpilot_cont_500_bf_scaffold_44_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13545..13736
DNA (192bp) protein (64aa)
DNA gyrase inhibitor YacG n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IRX8_RHOP2
DNA gyrase inhibitor YacG {ECO:0000256|HAMAP-Rule:MF_00649, ECO:0000256|SAAS:SAAS00085446}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
zinc-binding protein; K09862 hypothetical protein
SCNpilot_cont_500_bf_scaffold_44_trna_1
unknown

Not on your lists

13825..13897
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_44_17
GWB2_Geobacteraceae_52_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13980..15503
DNA (1524bp) protein (508aa)
Putative uncharacterized protein id=2162987 bin=GWB2_Geobacter-like_52_12 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWB2_Geobacter-like_52_12 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein
Tax=GWB2_Geobacteraceae_52_12_curated
SCNpilot_cont_500_bf_scaffold_44_18
unknown

Not on your lists

comp(15469..15633)
DNA (165bp) protein (55aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_44_19
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15791..16318
DNA (528bp) protein (176aa)
Putative membrane protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RBQ9_PELHB
Putative membrane protein {ECO:0000313|EMBL:CDP53174.1}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_44_20
Devosia sp. DDB001, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16331..17818)
DNA (1488bp) protein (496aa)
Glycerol kinase {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376}; EC=2.7.1.30 {ECO:0000256|HAMAP-Rule:MF_00186, ECO:0000256|SAAS:SAAS00029376};; ATP:glycerol 3-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00186}; Glycerokinase {ECO:0000256|HAMAP-Rule:MF_00186}; TaxID=1228055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. DDB001.;"
glycerol kinase (EC:2.7.1.30); K00864 glycerol kinase [EC:2.7.1.30]
Glycerol kinase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ03_9RHIZ
SCNpilot_cont_500_bf_scaffold_44_21
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17815..19335)
DNA (1521bp) protein (507aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]
glycerol-3-phosphate dehydrogenase n=1 Tax=Rhizobium leguminosarum RepID=UPI0003703C27
SCNpilot_cont_500_bf_scaffold_44_22
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19478..20410
DNA (933bp) protein (311aa)
Malonate transporter, putative n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA96_PELHB
Uncharacterized protein {ECO:0000313|EMBL:KFL27728.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;"
malonate transporter; K07088
SCNpilot_cont_500_bf_scaffold_44_23
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20424..21188)
DNA (765bp) protein (255aa)
Protein containing transglutaminase-like domain, putative cysteine protease n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA97_PELHB
Transglutaminase-like domain protein {ECO:0000313|EMBL:KFC68410.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
protein containing transglutaminase-like domain cysteine protease
SCNpilot_cont_500_bf_scaffold_44_24
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21188..22132)
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA98_PELHB
A alpha-helical domain with a conserved ER moti {ECO:0000313|EMBL:KKB85998.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_44_25
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22133..23527)
DNA (1395bp) protein (465aa)
Uncharacterized protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RA99_PELHB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKB85999.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_44_26
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23639..25933)
DNA (2295bp) protein (765aa)
glucan 1,4-alpha-glucosidase (EC:3.2.1.3); K01178 glucoamylase [EC:3.2.1.3] rbh
Glucan 1,4-alpha-glucosidase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BEB0_MEISD rbh
Glucan 1,4-alpha-glucosidase {ECO:0000313|EMBL:KKB76014.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
SCNpilot_cont_500_bf_scaffold_44_27
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25923..26708)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037CCC35 rbh
Glucose 1-dehydrogenase {ECO:0000313|EMBL:EJU13389.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_44_28
Devosia sp. LC5, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26858..27787
DNA (930bp) protein (310aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Rhizobium sp. CF080 RepID=J3AT82_9RHIZ rbh
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KFC68407.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;"
putative glycerate dehydrogenase (GyaR-like protein) rbh
SCNpilot_cont_500_bf_scaffold_44_29
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27806..29095)
DNA (1290bp) protein (430aa)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylpyruvate transferase {ECO:0000256|HAMAP-Rule:MF_00111}; UDP-N-acetylglucosamine enolpyruvyl transferase {ECO:0000256|HAMAP-Rule:MF_00111}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase; K00790 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [EC:2.5.1.7] rbh
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R9M6_PELHB rbh
Displaying items 1-30 of 1189 in total

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