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SCNpilot_cont_500_bf_scaffold_194

Search features with annotation key words

Displaying items 1-30 of 138 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_194_1
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(76..1518)
DNA (1443bp) protein (481aa)
beta-fructosidase, levanase/invertase; K01212 levanase [EC:3.2.1.65]
Putative glycosidase n=1 Tax=Gordonia amarae NBRC 15530 RepID=G7GV66_9ACTO rbh
Putative glycosidase {ECO:0000313|EMBL:GAB07491.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
SCNpilot_cont_500_bf_scaffold_194_2
CG_Arma_01, Armatimonadetes, Bacteria

Not on your lists

comp(1526..2968)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B77B11 rbh
sulfatase
Tax=CG_Arma_01
SCNpilot_cont_500_bf_scaffold_194_3
unknown

Not on your lists

comp(2965..3714)
DNA (750bp) protein (250aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_194_4
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3711..4553)
DNA (843bp) protein (281aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ATV4_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC94752.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
binding-protein-dependent transporters inner membrane component
SCNpilot_cont_500_bf_scaffold_194_5
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4550..5497)
DNA (948bp) protein (316aa)
ABC transporter, permease protein n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3ATV5_9CLOT
ABC transporter, permease protein {ECO:0000313|EMBL:EFC94753.1}; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
sugar ABC transporter permease protein
SCNpilot_cont_500_bf_scaffold_194_6
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5494..6792)
DNA (1299bp) protein (433aa)
ABC transporter, solute-binding protein (Fragment) n=1 Tax=Clostridium hathewayi DSM 13479 RepID=D3AUU9_9CLOT
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFC94407.1}; Flags: Fragment;; TaxID=566550 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi DSM 13479.;"
ABC-type sugar transport system, periplasmic component
SCNpilot_cont_500_bf_scaffold_194_7
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6878..7942)
DNA (1065bp) protein (355aa)
LacI family transcriptional regulator n=1 Tax=Paenibacillus mucilaginosus K02 RepID=I0BER0_9BACL
LacI family transcriptional regulator {ECO:0000313|EMBL:AFH60857.2}; TaxID=997761 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus K02.;"
LacI family transcriptional regulator; K02529 LacI family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_194_8
unknown

Not on your lists

comp(7929..8135)
DNA (207bp) protein (69aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_194_9
Mesorhizobium sp. ORS3324, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8135..8767)
DNA (633bp) protein (211aa)
Major intrinsic protein n=1 Tax=Rhizobium leguminosarum bv. trifolii (strain WSM1325) RepID=C6B1U0_RHILS
Putative transport transmembrane protein (Aquaporin-like) {ECO:0000313|EMBL:CDX21831.1}; TaxID=1505932 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3324.;"
major intrinsic protein
SCNpilot_cont_500_bf_scaffold_194_10
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8812..9342)
DNA (531bp) protein (177aa)
Putative arsenate reductase arsC-like protein n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2IX80_POLGS
Uncharacterized protein {ECO:0000313|EMBL:KFL31197.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
arsenate reductase
SCNpilot_cont_500_bf_scaffold_194_11
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9332..9691)
DNA (360bp) protein (120aa)
ArsR family transcriptional regulator n=1 Tax=Paracoccus sp. TRP RepID=UPI000225F739
ArsR family transcriptional regulator {ECO:0000313|EMBL:KKB84641.1}; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_194_12
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9793..11148
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IMN8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:ESQ11347.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
NAD(FAD)-dependent dehydrogenase
SCNpilot_cont_500_bf_scaffold_194_13
Mesorhizobium sp. LNHC252B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11190..11516
DNA (327bp) protein (109aa)
UPI0003CF7AB8 related cluster n=1 Tax=unknown RepID=UPI0003CF7AB8
ArsR family transcriptional regulator {ECO:0000313|EMBL:ESY71942.1}; TaxID=1287252 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LNHC252B00.;"
ArsR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_194_14
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11580..13016
DNA (1437bp) protein (479aa)
FAD dependent oxidoreductase n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUS3_9RHIZ rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHK55509.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_194_15
Mesorhizobium alhagi, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13032..14222
DNA (1191bp) protein (397aa)
Major facilitator superfamily protein n=1 Tax=Mesorhizobium alhagi CCNWXJ12-2 RepID=H0HUS4_9RHIZ
Major facilitator superfamily protein {ECO:0000313|EMBL:EHK55510.1}; TaxID=1107882 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium alhagi CCNWXJ12-2.;"
major facilitator superfamily protein rbh
SCNpilot_cont_500_bf_scaffold_194_16
Devosia geojensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14258..14719)
DNA (462bp) protein (154aa)
molybdenum cofactor biosynthesis protein MoaE, molybdopterin converting factor subunit 2; K03635 molybdopterin synthase catalytic subunit [EC:2.-.-.-]
Molybdenum cofactor biosynthesis protein MoaE, molybdopterin converting factor subunit 2 n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R680_PELHB
Molybdenum cofactor biosynthesis protein MoaE {ECO:0000313|EMBL:KKB13285.1}; TaxID=443610 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia geojensis.;"
SCNpilot_cont_500_bf_scaffold_194_17
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14725..15981)
DNA (1257bp) protein (419aa)
MoeA-like molybdopterin cofactor biosynthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
MoeA-like molybdopterin cofactor biosynthesis protein n=1 Tax=Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1) RepID=C5B450_METEA
MoeA-like molybdopterin cofactor biosynthesis protein {ECO:0000313|EMBL:ACS43232.1}; TaxID=272630 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain ATCC 14718 / DSM 1338 / AM1).;"
SCNpilot_cont_500_bf_scaffold_194_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16022..18484)
DNA (2463bp) protein (821aa)
arsenite oxidase large subunit; K08356 arsenite oxidase large subunit [EC:1.20.9.1]
Arsenite oxidase large subunit n=1 Tax=Oceanibaculum indicum P24 RepID=K2K0P8_9PROT
Arsenite oxidase large subunit {ECO:0000313|EMBL:EKE76334.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
SCNpilot_cont_500_bf_scaffold_194_19
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18496..19026)
DNA (531bp) protein (177aa)
arsenite oxidase small subunit (EC:1.20.98.1); K08355 arsenite oxidase small subunit [EC:1.20.9.1]
Arsenite oxidase, small subunit {ECO:0000313|EMBL:ADH88602.1}; EC=1.20.9.1 {ECO:0000313|EMBL:ADH88602.1};; Flags: Precursor;; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
arsenite oxidase small subunit n=1 Tax=Afipia birgiae RepID=UPI00036B73CB
SCNpilot_cont_500_bf_scaffold_194_20
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19192..20511)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI000382B419
two component sigma54 specific Fis family transcriptional regulator
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ABS69172.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_194_21
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20501..21961)
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
putative sensor histidine kinase (EC:2.7.13.3) rbh
hypothetical protein n=1 Tax=Amorphus coralli RepID=UPI00036DBA1C rbh
SCNpilot_cont_500_bf_scaffold_194_22
Mesorhizobium metallidurans, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21958..22836)
DNA (879bp) protein (293aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FA124
Uncharacterized protein {ECO:0000313|EMBL:CCV04580.1}; TaxID=1297569 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium metallidurans STM 2683.;"
phosphate/phosphonate ABC transporter; K02044 phosphonate transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_194_23
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22983..23996
DNA (1014bp) protein (338aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_01225}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
Cyclic pyranopterin monophosphate synthase n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YMI4_MOBAS
moaA; radical SAM protein; K03639 molybdenum cofactor biosynthesis protein
SCNpilot_cont_500_bf_scaffold_194_24
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24068..24697
DNA (630bp) protein (210aa)
Molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316, ECO:0000256|SAAS:SAAS00049907};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256
Molybdenum cofactor guanylyltransferase n=1 Tax=Ahrensia sp. R2A130 RepID=E0MKW7_9RHOB
mobA; molybdopterin-guanine dinucleotide biosynthesis protein A
SCNpilot_cont_500_bf_scaffold_194_25
Hoeflea sp. BAL378, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24651..25175
DNA (525bp) protein (175aa)
mogA; molybdenum cofactor biosynthesis protein; K03831 molybdopterin adenylyltransferase [EC:2.7.7.75]
Molybdenum cofactor synthesis domain-containing protein n=1 Tax=Brucella inopinata BO1 RepID=E0DR49_9RHIZ
Molybdopterin adenylyltransferase {ECO:0000313|EMBL:KGF70486.1}; TaxID=1547437 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. BAL378.;"
SCNpilot_cont_500_bf_scaffold_194_26
Devosia psychrophila, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25756..27324)
DNA (1569bp) protein (523aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO:0000256|HAMAP-Rule:MF_00344}; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_00344}; TaxID=728005 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia psychrophila.;"
guaA; GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]
GMP synthase n=1 Tax=Kaistia granuli RepID=UPI00036D75CE rbh
SCNpilot_cont_500_bf_scaffold_194_27
Devosia chinhatensis, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27370..27852)
DNA (483bp) protein (161aa)
Uncharacterized protein n=2 Tax=Labrenzia RepID=U7FKU3_9RHOB
CrtK/TspO family sensor protein {ECO:0000313|EMBL:KKB09156.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;"
tryptophan-rich sensory protein; K07185 tryptophan-rich sensory protein
SCNpilot_cont_500_bf_scaffold_194_28
Devosia insulae, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27885..29183)
DNA (1299bp) protein (433aa)
sun family protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] rbh
Sun family protein n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFW3_PELHB rbh
MFS transporter {ECO:0000313|EMBL:KKB83045.1}; TaxID=1116389 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia insulae DS-56.;"
SCNpilot_cont_500_bf_scaffold_194_29
Devosia limi, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29183..30685)
DNA (1503bp) protein (501aa)
inosine-5'-monophosphate dehydrogenase; K00088 IMP dehydrogenase [EC:1.1.1.205] rbh
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1121477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia limi DSM 17137.;"
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RFW0_PELHB rbh
SCNpilot_cont_500_bf_scaffold_194_30
Devosia soli, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30791..32071)
DNA (1281bp) protein (427aa)
Uncharacterized protein {ECO:0000313|EMBL:KKB76681.1}; TaxID=361041 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia soli.;"
Displaying items 1-30 of 138 in total

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