ggKbase home page

SCNpilot_cont_500_bf_scaffold_1936

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1936_1
Octadecabacter antarcticus, Octadecabacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(224..985)
DNA (762bp) protein (254aa)
Putative inositol monophosphatase n=1 Tax=Octadecabacter antarcticus 307 RepID=M9R2P2_9RHOB
putative inositol monophosphatase
Putative inositol monophosphatase {ECO:0000313|EMBL:AGI66492.1}; TaxID=391626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Octadecabacter.;" source="Octadecabacter antarcticus 307.;"
SCNpilot_cont_500_bf_scaffold_1936_2
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(982..2427)
DNA (1446bp) protein (482aa)
glycerol kinase n=1 Tax=Pseudomonas aeruginosa RepID=UPI0002EF7BEF
Glycerol kinase {ECO:0000313|EMBL:EZO93390.1}; TaxID=1418240 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BWH054.;"
glycerol kinase
SCNpilot_cont_500_bf_scaffold_1936_3
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2427..3662)
DNA (1236bp) protein (412aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037D2AC1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
FAD-dependent pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:ABM57434.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Verminephrobacter.;" source="Verminephrobacter eiseniae (strain EF01-2).;"
SCNpilot_cont_500_bf_scaffold_1936_4
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3659..5065)
DNA (1407bp) protein (469aa)
FAD dependent oxidoreductase n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A378_9PROT rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EHL99508.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
FAD-dependent oxidoreductase
SCNpilot_cont_500_bf_scaffold_1936_5
Devosia riboflavina, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5154..5927
DNA (774bp) protein (258aa)
Transcriptional regulator, DeoR family n=1 Tax=Citreicella sp. SE45 RepID=D0D886_9RHOB
DeoR faimly transcriptional regulator {ECO:0000313|EMBL:KFL31274.1}; TaxID=46914 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia riboflavina.;"
putative transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
SCNpilot_cont_500_bf_scaffold_1936_6
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6078..8084
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036E0608 rbh
ABC-type dipeptide transport system, periplasmic component {ECO:0000313|EMBL:AKI00533.1}; Flags: Precursor;; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
oligopeptide ABC transporter periplasmic oligopeptide-binding protein; K02035 peptide/nickel transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_1936_7
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8159..9142
DNA (984bp) protein (328aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Mesorhizobium sp. (strain BNC1) RepID=Q11AR1_MESSB
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AKI00532.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
binding-protein-dependent transport systems inner membrane component; K02033 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_1936_8
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9148..10287
DNA (1140bp) protein (380aa)
Oligopeptide ABC transporter, permease protein n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YAE2_DICT6
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:AKI00531.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
oligopeptide ABC transporter permease; K02034 peptide/nickel transport system permease protein
SCNpilot_cont_500_bf_scaffold_1936_9
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10287..11306
DNA (1020bp) protein (340aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein n=1 Tax=Rhizobium leguminosarum bv. trifolii WSM2012 RepID=J0VQ12_RHILT
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AKI00530.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
peptide ABC transporter ATPase; K02031 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1936_10
Hoeflea sp. IMCC20628, Hoeflea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11303..12349
DNA (1047bp) protein (349aa)
Oligopeptide/dipeptide ABC transporter, ATPase subunit n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E3A2_DICTD
Oligopeptide/dipeptide ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AKI00529.1}; TaxID=1620421 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Hoeflea.;" source="Hoeflea sp. IMCC20628.;"
oligopeptide/dipeptide ABC transporter ATPase; K02032 peptide/nickel transport system ATP-binding protein
SCNpilot_cont_500_bf_scaffold_1936_11
uncultured delta proteobacterium HF0200_19J16, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12346..13908
DNA (1563bp) protein (521aa)
PREDICTED: arylsulfatase K-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16A19
Arylsulfatase a and related enzymes {ECO:0000313|EMBL:ADI17998.1}; TaxID=710831 species="Bacteria; Proteobacteria; Deltaproteobacteria; environmental samples.;" source="uncultured delta proteobacterium HF0200_19J16.;"
sulfatase
SCNpilot_cont_500_bf_scaffold_1936_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13905..14741
DNA (837bp) protein (279aa)
HAD-superfamily hydrolase, subfamily IIA n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07T61_RHOP5
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44192.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
HAD family hydrolase
SCNpilot_cont_500_bf_scaffold_1936_13
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14778..16319
DNA (1542bp) protein (514aa)
PREDICTED: arylsulfatase K-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C16A19 rbh
Sulfatase {ECO:0000313|EMBL:EKE78819.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
sulfatase
Displaying 13 items

View Taxonomy