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SCNpilot_cont_500_bf_scaffold_10_11

Organism: SCNpilot_BF_INOC_Rhizobiales_65_18

near complete RP 52 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 12 / 38
Location: comp(12005..12841)

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B74953 similarity UNIREF
DB: UNIREF100
  • Identity: 44.0
  • Coverage: 257.0
  • Bit_score: 208
  • Evalue 1.10e-50
Peptide/opine/nickel uptake family ABC transporter, permease protein {ECO:0000313|EMBL:KFC68393.1}; TaxID=1502724 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. LC5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.8
  • Coverage: 262.0
  • Bit_score: 250
  • Evalue 3.60e-63
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 42.0
  • Coverage: 264.0
  • Bit_score: 204
  • Evalue 3.90e-50

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Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 837
ATGAGCGCGCTCCGCCACGATCCGCCGGCCCTGCGCATCGCCATCGTCGCGGCGCTGCTGTTCCTGCTGCTCGGCTTCCTGTCGATCCTGTGGACGCCCTACCCGGTGACCAGCCTCGACGTGGCGGCGGCGCTGCAGGATCCGGGCGGCGCGCATTGGCTGGGCACCGACGAGCTCGGCCGCGACGTGCTGTCGCTGCTGATGAAAGGTATCCTCACGAGCTTCGTGGTGGCGGGCGTGGCGGTGGCCATCGGCGCCCTGCTCGGCGTGCCGCTGGGGCTGGCCGCGGCGCTGCTCGGCCCCTATGCCGAGCTCGGCGCCACCGGCGTCAGCGGCTATCTGCTGACGCTGCCCGCCTTCGTGCTGGCGGTGCTGTTCGCCTGCCTGTTCGGGCCGAGCGCGGCGACGCTGATGGTGGCCATCGGCATCGCCAACATCGCGCCGTTGGCGCTCGCCACGCGCGACGCCATCCGCACCGCGGCGGCGCCCGACTACGTCGCGGCCGGGCGGCTCGCCGGCGGCAGCGGCCTCGACCTCGCCCGCCGGCACATGCTGCCCACCATCCTCAGGCTGATCCTGGCGCAGGCCATCGCGCAGCTCGCGGTCGGCGTGCTGGCCGAGGCCACCCTCTCCTATGTCGGGCTCGGCACGCAGCCGCCCGCCACCAGCCTCGGCCTGCTGCTCGCCGACGCGCAGGCCTATGCCGCCGGCCGGCCGGGGCTGCTGTTCGTTCCCGGCCTCGCGCTGCTGCTCATCGCGCTGGCGCTCACCATCGTCAGCCGCGAGATCCGCGCGGCGGCCGGCGACACGACCGGAGGCGCCCATGGCGCTGCTTAA
PROTEIN sequence
Length: 279
MSALRHDPPALRIAIVAALLFLLLGFLSILWTPYPVTSLDVAAALQDPGGAHWLGTDELGRDVLSLLMKGILTSFVVAGVAVAIGALLGVPLGLAAALLGPYAELGATGVSGYLLTLPAFVLAVLFACLFGPSAATLMVAIGIANIAPLALATRDAIRTAAAPDYVAAGRLAGGSGLDLARRHMLPTILRLILAQAIAQLAVGVLAEATLSYVGLGTQPPATSLGLLLADAQAYAAGRPGLLFVPGLALLLIALALTIVSREIRAAAGDTTGGAHGAA*