name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_101_1
unknown
|
Not on your lists |
1..78
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_101_2
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
100..414
|
30S ribosomal protein S10 n=7 Tax=Comamonadaceae RepID=RS10_POLNA
rpsJ; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_500_bf_scaffold_101_3
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
561..2165
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBE8_VARPE
rbh
Variovorax paradoxus strain MEDvA23 contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33380.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_101_4
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2177..2701
|
Uncharacterized protein n=1 Tax=Variovorax paradoxus B4 RepID=T1XJ63_VARPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGU52150.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_500_bf_scaffold_101_5
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2926..3606
|
50S ribosomal protein L3 n=1 Tax=Variovorax sp. CF313 RepID=J2JN55_9BURK
rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rplC; 50S ribosomal protein L3
rbh
|
|
SCNpilot_cont_500_bf_scaffold_101_6
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3606..4226
|
50S ribosomal protein L4 n=1 Tax=Variovorax paradoxus RepID=UPI00036EB6BD
rbh
rplD; 50S ribosomal protein L4; K02926 large subunit ribosomal protein L4
rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_500_bf_scaffold_101_7
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4223..4558
|
50S ribosomal protein L23 n=4 Tax=Variovorax RepID=C5CP51_VARPS
50S ribosomal protein L25/l23; K02892 large subunit ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369, ECO:0000256|RuleBase:RU003935}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_101_8
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4561..5385
|
50S ribosomal protein L2 n=1 Tax=Variovorax sp. CF313 RepID=J2K7T3_9BURK
rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
rbh
|
|
SCNpilot_cont_500_bf_scaffold_101_9
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5396..5674
|
30S ribosomal protein S19 n=4 Tax=Variovorax RepID=RS19_VARPS
rpsS; 30S ribosomal protein S19
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
|
|
SCNpilot_cont_500_bf_scaffold_101_10
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5684..6016
|
50S ribosomal protein L22 n=4 Tax=Variovorax RepID=RL22_VARPS
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_101_11
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6034..6945
|
30S ribosomal protein S3 n=1 Tax=Variovorax paradoxus RepID=UPI00037635CE
rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3
rbh
|
|
SCNpilot_cont_500_bf_scaffold_101_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6998..7414
|
50S ribosomal protein L16 n=2 Tax=Variovorax RepID=E6VBD9_VARPE
50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_101_13
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7428..7679
|
50S ribosomal protein L29 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CP45_VARPS
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_500_bf_scaffold_101_14
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7689..7958
|
30S ribosomal protein S17 n=2 Tax=Variovorax paradoxus RepID=RS17_VARPS
rpsQ; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
|
|
SCNpilot_cont_500_bf_scaffold_101_15
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8041..8547
|
Redoxin domain protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBD6_VARPE
rbh
redoxin domain-containing protein
rbh
Redoxin domain protein {ECO:0000313|EMBL:ADU39736.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_101_16
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(8553..9140)
|
GCN5 family acetyltransferase n=1 Tax=Variovorax paradoxus RepID=UPI00037CA4A6
rbh
Acetyltransferase {ECO:0000313|EMBL:EJL69306.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
GCN5-like N-acetyltransferaser
rbh
|
|
SCNpilot_cont_500_bf_scaffold_101_17
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9137..9898)
|
cytochrome B561 n=1 Tax=Variovorax paradoxus RepID=UPI0003737D57
rbh
Cytochrome b {ECO:0000313|EMBL:EJL69307.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
cytochrome b561
rbh
|
|
SCNpilot_cont_500_bf_scaffold_101_18
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10006..10452
|
Cytochrome c class II n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6VBD3_VARPE
Variovorax paradoxus strain MEDvA23 contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33393.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
cytochrome c class ii
|
|
SCNpilot_cont_500_bf_scaffold_101_19
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10504..11001)
|
redoxin n=1 Tax=Variovorax paradoxus RepID=UPI0003694837
rbh
Peroxiredoxin {ECO:0000313|EMBL:EJL69309.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
redoxin domain-containing protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_101_20
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11157..11642
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JN70_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69310.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_101_21
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11795..12250
|
Phosphotransferase system, mannose/fructose-specific component IIA n=1 Tax=Variovorax sp. CF313 RepID=J3CDK1_9BURK
Phosphotransferase system, mannose/fructose-specific component IIA {ECO:0000313|EMBL:EJL69311.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
putative fructose-specific PTS system, IIA component
|
|
SCNpilot_cont_500_bf_scaffold_101_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12219..12488
|
phosphocarrier protein HPr n=1 Tax=Variovorax paradoxus RepID=UPI00037B373E
phosphotransferase system, phosphocarrier protein hpr; K11189 phosphocarrier protein
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:ADU39729.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_101_23
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12499..14310
|
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9); K08483 phosphotransferase system, enzyme I, PtsI [EC:2.7.3.9]
rbh
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Variovorax paradoxus RepID=UPI000366AD2F
rbh
|
|
SCNpilot_cont_500_bf_scaffold_101_24
Caulobacter sp. AP07, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14373..15089
|
Putative membrane protein n=1 Tax=Caulobacter sp. AP07 RepID=J2PZJ9_9CAUL
Putative membrane protein {ECO:0000313|EMBL:EJL33277.1}; Flags: Precursor;; TaxID=1144304 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. AP07.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_101_25
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15196..15573
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J3CD89_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69314.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_101_26
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15685..16149
|
Uncharacterized protein n=1 Tax=Variovorax sp. CF313 RepID=J2JN76_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL69315.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_101_27
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16274..16666
|
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CP33_VARPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACS21497.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_500_bf_scaffold_101_28
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16660..17046
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00035C567C
Variovorax paradoxus strain MEDvA23 contig_22, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ33402.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_101_29
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17031..17789
|
response regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003784A6A
rbh
winged helix family two component transcriptional regulator; K11329 two-component system, OmpR family, response regulator RpaB
rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU39724.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_101_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17786..19213
|
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI0003676064
rbh
integral membrane sensor signal transduction histidine kinase
rbh
|