name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_921_1
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2..217)
|
Electron transfer flavoprotein alpha/beta-subunit n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V9P1_VARPE
electron transfer flavoprotein alpha/beta-subunit; K03521 electron transfer flavoprotein beta subunit
Variovorax paradoxus strain MEDvA23 contig_26, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ32752.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;"
|
|
SCNpilot_cont_500_bf_scaffold_921_2
R_Alphaproteobacteria_66_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(257..1225)
|
Extra-cytoplasmic solute receptor BugT n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GX28_CUPNN
bugT2; extra-cytoplasmic solute receptor BugT
Tax=RIFCSPHIGHO2_12_FULL_Alphaproteobacteria_66_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_921_3
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(1291..2481)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z542_9BRAD
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:BAM88142.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
|
|
SCNpilot_cont_500_bf_scaffold_921_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(2490..3644)
|
Acyl-CoA dehydrogenase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXK3_9BURK
putative acyl-CoA dehydrogenase fadE25
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_cont_500_bf_scaffold_921_5
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3942..5189
|
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037E5C00
rbh
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48310.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
acyl-CoA dehydrogenase
|
|
SCNpilot_cont_500_bf_scaffold_921_6
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5200..6252
|
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003702DED
rbh
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48311.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
aminoglycoside phosphotransferase
|
|
SCNpilot_cont_500_bf_scaffold_921_7
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
6277..6942
|
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000361B281
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48430.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
nitroreductase
|
|
SCNpilot_cont_500_bf_scaffold_921_8
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7118..7984
|
MaoC-like dehydratase n=1 Tax=Tistrella mobilis (strain KA081020-065) RepID=I3TT16_TISMK
mfeB; MaoC-like dehydratase
MaoC-like dehydratase {ECO:0000313|EMBL:AFK55904.1}; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Tistrella.;" source="Tistrella mobilis (strain KA081020-065).;"
|
|
SCNpilot_cont_500_bf_scaffold_921_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8027..8899
|
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037B92E1
rbh
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48301.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
inner-membrane translocator
|
|
SCNpilot_cont_500_bf_scaffold_921_10
Intrasporangium chromatireducens, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8899..10014
|
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037CA0AA
Uncharacterized protein {ECO:0000313|EMBL:EWT07830.1}; TaxID=584657 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium chromatireducens Q5-1.;"
livM; branched-chain amino acid ABC transporter system, permease protein
|
|
SCNpilot_cont_500_bf_scaffold_921_11
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10001..10699
|
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00036849EE
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48303.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter-like protein
|
|
SCNpilot_cont_500_bf_scaffold_921_12
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10696..11391
|
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI0003658D7F
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48304.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter-like protein
|
|
SCNpilot_cont_500_bf_scaffold_921_13
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
11410..12591
|
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI000374BF76
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48305.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
|
|
SCNpilot_cont_500_bf_scaffold_921_14
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12614..14170
|
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI00037E1268
4-coumarate--CoA ligase {ECO:0000313|EMBL:KIF82802.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
amp-dependent synthetase and ligase
|
|
SCNpilot_cont_500_bf_scaffold_921_15
RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14205..15353
|
alpha-methylacyl-CoA racemase (EC:5.1.99.4)
rbh
Alpha-methylacyl-CoA racemase id=2961502 bin=GWC2_Methylomirabilis_70_16 species=Streptomyces sp. e14 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated
|
|
SCNpilot_cont_500_bf_scaffold_921_16
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15393..15974)
|
phosphoglycerate mutase; K15634 probable phosphoglycerate mutase [EC:5.4.2.1]
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E816_9SPHN
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48300.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
|
|
SCNpilot_cont_500_bf_scaffold_921_17
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(15999..17036)
|
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1XWK7_LEPCP
rbh
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48306.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
alcohol dehydrogenase
rbh
|
|
SCNpilot_cont_500_bf_scaffold_921_18
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17199..18371
|
l-carnitine dehydratase/bile acid-inducible protein f; K01796 alpha-methylacyl-CoA racemase [EC:5.1.99.4]
rbh
hypothetical protein n=1 Tax=Paracoccus sp. N5 RepID=UPI00037B7423
rbh
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48312.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
|
|
SCNpilot_cont_500_bf_scaffold_921_19
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18368..19153
|
Putative oxidoreductase, short-chain dehydrogenase/reductase n=1 Tax=Pseudomonas putida (strain DOT-T1E) RepID=I7C472_PSEPT
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48308.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
butA; oxidoreductase, short-chain dehydrogenase/reductase
|
|
SCNpilot_cont_500_bf_scaffold_921_20
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
19203..19991
|
Short-chain dehydrogenase/reductase SDR n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HQI8_PARL1
Bradyrhizobium elkanii strain UASWS1015 Contig177, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48309.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
short-chain dehydrogenase/reductase SDR
|
|
SCNpilot_cont_500_bf_scaffold_921_21
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20172..20489)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036FD287
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADU38951.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_921_22
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20497..20766)
|
prevent-host-death protein n=1 Tax=Variovorax paradoxus RepID=UPI00035E1FA7
prevent-host-death family protein
Prevent-host-death family protein {ECO:0000313|EMBL:ADU38952.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_921_23
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20866..22497)
|
gamma-glutamyltranspeptidase (EC:2.3.2.2)
rbh
Gamma-glutamyltranspeptidase {ECO:0000313|EMBL:AGU53481.1}; EC=2.3.2.2 {ECO:0000313|EMBL:AGU53481.1};; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;"
Gamma-glutamyltranspeptidase n=1 Tax=Variovorax paradoxus B4 RepID=T1XLQ9_VARPD
rbh
|
|
SCNpilot_cont_500_bf_scaffold_921_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22512..23498)
|
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003646AA4
rbh
hypothetical protein
rbh
Uncharacterized protein {ECO:0000313|EMBL:ACS18292.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_500_bf_scaffold_921_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23601..24635
|
LysR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00036E463A
rbh
LysR family transcriptional regulator
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACS18293.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;"
|
|
SCNpilot_cont_500_bf_scaffold_921_26
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24696..25619
|
Transcriptional regulator, LysR family n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GFA9_ALIDK
rbh
LysR family transcriptional regulator
rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AEB82760.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
|
|
SCNpilot_cont_500_bf_scaffold_921_27
Acidovorax sp. MR-S7, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
25701..27707
|
aconitate hydratase domain-containing protein; K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]
rbh
3-isopropylmalate dehydratase large subunit n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI000371CEF8
rbh
3-isopropylmalate dehydratase large subunit {ECO:0000313|EMBL:GAD23258.1}; TaxID=1268622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. MR-S7.;"
|
|
SCNpilot_cont_500_bf_scaffold_921_28
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27704..28690
|
Uncharacterized protein n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X4Z4_COMTE
rbh
Uncharacterized protein {ECO:0000313|EMBL:EED68772.1}; Flags: Precursor;; TaxID=399795 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni KF-1.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_921_29
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
28698..29183
|
4-hydroxy-4-methyl-2-oxoglutarate aldolase {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993}; Short=HMG aldolase {ECO:0000256|RuleBase:RU004338};; EC=4.1.1.3 {ECO:0000256|RuleBase:RU004338};; EC=4.1.3.17 {ECO:0000256|RuleBase:RU004338, ECO:0000256|SAAS:SAAS00063993};; Oxaloacetate decarboxylase {ECO:0000256|RuleBase:RU004338}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
Regulator of ribonuclease activity A n=1 Tax=Comamonas testosteroni KF-1 RepID=B7X4Z3_COMTE
menG; ribonuclease activity regulator protein RraA; K02553 regulator of ribonuclease activity A
|
|
SCNpilot_cont_500_bf_scaffold_921_30
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(29219..31201)
|
Penicillin-binding protein 2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7W4_ACIDE
Penicillin-binding protein 2 {ECO:0000313|EMBL:EJL74748.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
penicillin-binding protein 2
rbh
|