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SCNpilot_cont_500_bf_scaffold_92_10

Organism: SCNPILOT_EXPT_750_P_Variovorax_66_42

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(7547..8284)

Top 3 Functional Annotations

Value Algorithm Source
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family n=1 Tax=Variovorax sp. CF313 RepID=J2L447_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 245.0
  • Bit_score: 462
  • Evalue 2.90e-127
  • rbh
Amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family {ECO:0000313|EMBL:EJL80013.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 245.0
  • Bit_score: 462
  • Evalue 4.10e-127
polar amino acid ABC transporter, inner membrane subunit; K10003 glutamate/aspartate transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 244.0
  • Bit_score: 367
  • Evalue 3.10e-99
  • rbh

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 738
ATGCACTACAGCTGGGATTGGCTGATCTTCTTCAAACCCTCGGTCACGGGTGAGGGCCTGTACGGCTTGATGCTGCTGCGCGGATTGCTGTGGACAGTGGCGCTGTCCTTGCTGGCCTGGACACTGGCACTGGGTCTTGGTCTGATCGCCGGCGTTTCACGGACCCTGCCCAATCGGGCCGCGCGCTACCTGTCCACGGTGTACATCCACTGTTTTCGCAATACGCCGTTGCTCGTGCAGCTGTTTCTCTGGTACTTCGTCGTGCCGGAACTTTTACCTCTCGAATGGGGCAATGCGCTCAAGCAGATGAACCCGACCACGAACCAGTTCCTGACCGTGCTGGTGGGCCTCACCCTCTACACGGCTGCGAAGGCGGCCGAGCAGGTGCGTGCGGGCATCGAGTCGGTGCCGCGCAGCCAGAAGCAGGCAGCCATGGCGCTCGGCCTGGGGACCGCAGCGGCCTACCGCCATGTGATCCTGCCGCAGGCCCTTCGCATCGTCATCCCACCGCTGACCTCGGACTTCCTGAACGTGTTCAAGAACTCGGCCGTCGCGCTCACGATCGGACTCATGGAGCTGACCGGGCAGACGCGCCAGCTCAGTGAATTCAGTGCCCATCCGTTCGAGGCCTTTATTGCGGCGACGCTCATCTACATGGTGATCACCTACGGCGTGATCGTGCTGATGCGCCATATCGAGCGCCGGGTTCGGGTGCCCGGACTGCTGGGAGCCGCGTGA
PROTEIN sequence
Length: 246
MHYSWDWLIFFKPSVTGEGLYGLMLLRGLLWTVALSLLAWTLALGLGLIAGVSRTLPNRAARYLSTVYIHCFRNTPLLVQLFLWYFVVPELLPLEWGNALKQMNPTTNQFLTVLVGLTLYTAAKAAEQVRAGIESVPRSQKQAAMALGLGTAAAYRHVILPQALRIVIPPLTSDFLNVFKNSAVALTIGLMELTGQTRQLSEFSAHPFEAFIAATLIYMVITYGVIVLMRHIERRVRVPGLLGAA*