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SCNpilot_cont_500_bf_scaffold_76

Search features with annotation key words

Displaying items 1-30 of 403 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_76_1
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

592..1494
DNA (903bp) protein (301aa)
Bordetella petrii strain DSM 12804, complete genome n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HY91_BORPD rbh
Cytochrome C {ECO:0000313|EMBL:KCB45571.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_76_2
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1730..2155
DNA (426bp) protein (142aa)
Uncharacterized protein n=7 Tax=Proteobacteria RepID=A1W958_ACISJ
Uncharacterized protein {ECO:0000313|EMBL:AIJ45837.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni TK102.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_76_3
Pseudomonas chlororaphis, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2139..2441
DNA (303bp) protein (101aa)
Transcriptional regulator n=7 Tax=Proteobacteria RepID=A1W959_ACISJ
DNA-binding protein {ECO:0000313|EMBL:AKA21915.1}; TaxID=587753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas chlororaphis.;"
XRE family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_76_4
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2451..3680)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GTK1_PUSST rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEC20965.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_500_bf_scaffold_76_5
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3911..4888
DNA (978bp) protein (326aa)
Uncharacterized protein UPF0065 n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VTY1_POLNA
hypothetical protein
Uncharacterized protein UPF0065 {ECO:0000313|EMBL:ABM39109.1}; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
SCNpilot_cont_500_bf_scaffold_76_6
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5041..6015
DNA (975bp) protein (325aa)
Extra-cytoplasmic solute receptor family protein 56 n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S4T4_9BURK rbh
Extra-cytoplasmic solute receptor family protein 56 {ECO:0000313|EMBL:EHP42471.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
extra-cytoplasmic solute receptor family protein 56
SCNpilot_cont_500_bf_scaffold_76_7
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6051..6824)
DNA (774bp) protein (258aa)
Transcriptional regulator, GntR family n=1 Tax=Burkholderia sp. (strain CCGE1003) RepID=E1T9K6_BURSG
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_500_bf_scaffold_76_8
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6941..7408
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6V8J5_PSEA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR81586.1}; TaxID=381754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa (strain PA7).;"
SCNpilot_cont_500_bf_scaffold_76_9
Amycolatopsis mediterranei, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7416..8108)
DNA (693bp) protein (231aa)
GntR family transcriptional regulator n=1 Tax=Amycolatopsis benzoatilytica RepID=UPI00036A3163
GntR family transcriptional regulator; K03710 GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AEK45942.1}; TaxID=713604 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis mediterranei (strain S699) (Nocardia mediterranei).;"
SCNpilot_cont_500_bf_scaffold_76_10
Nakamurella multipartita, Nakamurella, Nakamurellales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8288..8683)
DNA (396bp) protein (132aa)
Endoribonuclease L-PSP n=1 Tax=Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) RepID=C8X9D6_NAKMY
endoribonuclease L-PSP; K07567 TdcF protein
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACV77204.1}; TaxID=479431 species="Bacteria; Actinobacteria; Nakamurellales; Nakamurellaceae; Nakamurella.;" source="Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 /; Y-104) (Microsphaera multipartita).;"
SCNpilot_cont_500_bf_scaffold_76_11
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8676..9539)
DNA (864bp) protein (288aa)
cmtE; 2-hydroxy-6-oxo-7-methylocta-2,4-dienoate hydrolase (EC:3.7.1.-)
hypothetical protein n=1 Tax=Ureibacillus thermosphaericus RepID=UPI000317390F
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_500_bf_scaffold_76_12
Rhodococcus sp. YK2, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9594..10733)
DNA (1140bp) protein (380aa)
Extradiol dioxygenase n=1 Tax=Rhodococcus sp. R04 RepID=G0ZPN1_9NOCA
Extradiol dioxygenase {ECO:0000313|EMBL:BAC00806.1}; TaxID=169536 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. YK2.;"
extradiol ring-cleavage dioxygenase, class III enzyme, subunit B
SCNpilot_cont_500_bf_scaffold_76_13
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10733..11491)
DNA (759bp) protein (253aa)
putative carboxymethylenebutenolidase; K01061 carboxymethylenebutenolidase [EC:3.1.1.45]
Carboxymethylenebutenolidase id=1804928 bin=GWB2_Desulfobacterales_56_26 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_500_bf_scaffold_76_14
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11503..13689)
DNA (2187bp) protein (729aa)
5-oxoprolinase (EC:3.5.2.9); K01474 N-methylhydantoinase B [EC:3.5.2.14] rbh
5-oxoprolinase (ATP-hydrolyzing) n=2 Tax=Mycobacterium RepID=A1UNV9_MYCSK rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_500_bf_scaffold_76_15
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13706..15799)
DNA (2094bp) protein (698aa)
5-oxoprolinase (EC:3.5.2.9); K01473 N-methylhydantoinase A [EC:3.5.2.14]
5-oxoprolinase n=1 Tax=Mycobacterium vaccae ATCC 25954 RepID=K0V9E7_MYCVA rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
SCNpilot_cont_500_bf_scaffold_76_16
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15988..18087)
DNA (2100bp) protein (700aa)
rep; ATP-dependent DNA helicase (EC:3.6.1.-); K03656 ATP-dependent DNA helicase Rep [EC:3.6.4.12] rbh
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
ATP-dependent DNA helicase n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T0Q4_ALCXX rbh
SCNpilot_cont_500_bf_scaffold_76_17
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18212..20473)
DNA (2262bp) protein (754aa)
priA; primosomal protein; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] rbh
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Primosomal protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9HY53_BORPD rbh
SCNpilot_cont_500_bf_scaffold_76_18
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20816..21889)
DNA (1074bp) protein (358aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37); K01599 uroporphyrinogen decarboxylase [EC:4.1.1.37] rbh
Uroporphyrinogen decarboxylase (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KU39_BORA1 rbh
SCNpilot_cont_500_bf_scaffold_76_19
Laribacter hongkongensis, Laribacter, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21936..22268)
DNA (333bp) protein (111aa)
Putative membrane transporter of cations and cationic drugs n=1 Tax=Laribacter hongkongensis (strain HLHK9) RepID=C1D7D4_LARHH
multidrug efflux system protein MdtI; K11742 spermidine export protein MdtI
Putative membrane transporter of cations and cationic drugs {ECO:0000313|EMBL:ACO74375.1}; TaxID=557598 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Laribacter.;" source="Laribacter hongkongensis (strain HLHK9).;"
SCNpilot_cont_500_bf_scaffold_76_20
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22278..22643)
DNA (366bp) protein (122aa)
Putative multidrug resistance transporter n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AP37_PSERE
Spermidine export protein MdtJ {ECO:0000313|EMBL:KJK09428.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5.;"
putative multidrug resistance transporter
SCNpilot_cont_500_bf_scaffold_76_21
unknown

Not on your lists

comp(22682..22837)
DNA (156bp) protein (52aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_76_22
Pantoea anthophila, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23213..24112
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Uliginosibacterium gangwonense RepID=UPI00037DE87E rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KKB05170.1}; TaxID=470931 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea anthophila.;"
transcriptional regulator, LysR family
SCNpilot_cont_500_bf_scaffold_76_23
R_Acidobacteria_59_13, Acidobacteria, Bacteria

Not on your lists

comp(24132..25112)
DNA (981bp) protein (327aa)
MFS transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FB2F4
extra-cytoplasmic solute receptor
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_59_13_curated
SCNpilot_cont_500_bf_scaffold_76_24
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25280..26023)
DNA (744bp) protein (248aa)
Transcriptional regulator n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMR0_9BURK
Transcriptional regulator {ECO:0000313|EMBL:EIF32012.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
IclR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_76_25
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26060..27025)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036151F1
Putative ring-cleavage extradiol dioxygenase {ECO:0000313|EMBL:EIF32013.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
putative biphenyl-2,3-diol 1,2-dioxygenase
SCNpilot_cont_500_bf_scaffold_76_26
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27148..27993
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000370A7FA
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EIF32015.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
alpha/beta hydrolase fold
SCNpilot_cont_500_bf_scaffold_76_27
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28005..28445
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HTX2_PSEUO
Uncharacterized protein {ECO:0000313|EMBL:ETM67161.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_76_28
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28456..29703
DNA (1248bp) protein (416aa)
Rieske (2Fe-2S) domain-containing protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMR5_9BURK rbh
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:EIF32017.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
putative dioxygenase hydroxylase component subunit alpha
SCNpilot_cont_500_bf_scaffold_76_29
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29715..30221
DNA (507bp) protein (169aa)
Small subunit of phenylpropionate dioxygenase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMR6_9BURK
Small subunit of phenylpropionate dioxygenase {ECO:0000313|EMBL:EIF32018.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
putative dioxygenase component subunit beta
SCNpilot_cont_500_bf_scaffold_76_30
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30224..31399
DNA (1176bp) protein (392aa)
Acetyl-CoA acetyltransferase n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMR7_9BURK rbh
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EIF32019.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
putative thiolase
Displaying items 1-30 of 403 in total

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