name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_130_1 |
Not on your lists |
3..164
|
Alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase {ECO:0000313|EMBL:CBI11018.1}; EC=1.1.1.1 {ECO:0000313|EMBL:CBI11018.1};; EC=1.1.1.284 {ECO:0000313|EMBL:CBI11018.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
adhC; Zn-dependent alcohol dehydrogenases, class III (EC:1.1.1.1 1.1.1.284); K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
Alcohol dehydrogenase class III/glutathione-dependent formaldehyde dehydrogenase n=1 Tax=mine drainage metagenome RepID=E6QUU5_9ZZZZ
|
|
SCNpilot_cont_500_bf_scaffold_130_2
Paracoccus versutus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(213..1142)
|
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0IZY2_ACIMA
Transcriptional regulator {ECO:0000313|EMBL:KGJ11059.1}; TaxID=34007 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus versutus (Thiobacillus versutus).;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_130_3
Pseudomonas syringae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
1198..2499
|
3-carboxy-cis,cis-muconate cycloisomerase; K01857 3-carboxy-cis,cis-muconate cycloisomerase [EC:5.5.1.2]
3-carboxy-cis, cis-muconate cycloisomerase n=2 Tax=Pseudomonas syringae pv. syringae RepID=K2SF36_PSESY
3-carboxy-cis, cis-muconate cycloisomerase {ECO:0000313|EMBL:EKG38178.1}; TaxID=1154762 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.;" source="Pseudomonas syringae pv. avellanae str. ISPaVe037.;"
|
|
SCNpilot_cont_500_bf_scaffold_130_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2496..3389
|
Dicarboxylic acid hydrolase n=1 Tax=Novosphingobium resinovorum RepID=Q2TPV9_9SPHN
Bradyrhizobium elkanii strain UASWS1015 Contig149, whole genome shotgun sequence {ECO:0000313|EMBL:KIU53171.1}; Flags: Fragment;; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
amidohydrolase
|
|
SCNpilot_cont_500_bf_scaffold_130_5
Advenella mimigardefordensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3386..4375
|
MFS transporter n=1 Tax=Advenella kashmirensis W13003 RepID=V8QXM6_9BURK
Putative Bug-like extracytoplasmic solute binding receptor, TTT family {ECO:0000313|EMBL:AHG64614.1}; TaxID=1247726 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella mimigardefordensis DPN7.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_130_6
Janthinobacterium sp. Marseille, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4493..5548
|
vanA; vanillate monooxygenase subunit alpha (EC:1.14.13.82); K03862 vanillate monooxygenase [EC:1.14.13.82]
rbh
Vanillate monooxygenase, alpha subunit {ECO:0000313|EMBL:ABR88415.1}; EC=1.14.13.82 {ECO:0000313|EMBL:ABR88415.1};; TaxID=375286 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium sp. (strain Marseille) (Minibacterium massiliensis).;"
Vanillate monooxygenase, alpha subunit n=1 Tax=Janthinobacterium sp. (strain Marseille) RepID=A6SXB6_JANMA
rbh
|
|
SCNpilot_cont_500_bf_scaffold_130_7
RBG_16_Gamma2_60_9_curated, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5604..6608
|
Uncharacterized protein UPF0065 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46V12_CUPPJ
hypothetical protein
Tax=RBG_16_Gamma2_60_9_curated
|
|
SCNpilot_cont_500_bf_scaffold_130_8
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6627..7166)
|
MarR family transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI0003736074
MarR family transcriptional regulator
Regulatory protein MarR {ECO:0000313|EMBL:ADU38285.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;"
|
|
SCNpilot_cont_500_bf_scaffold_130_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7310..7672
|
extradiol ring-cleavage dioxygenase LigAB, LigA subunit; K04100 protocatechuate 4,5-dioxygenase, alpha chain [EC:1.13.11.8]
hypothetical protein n=1 Tax=Marinobacterium rhizophilum RepID=UPI0003699ABF
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_130_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
7674..8513
|
protocatechuate 4,5-dioxygenase subunit beta; K04101 protocatechuate 4,5-dioxygenase, beta chain [EC:1.13.11.8]
rbh
protocatechuate 3,4-dioxygenase subunit beta n=1 Tax=Marinobacterium rhizophilum RepID=UPI00037ECA39
rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
|
|
SCNpilot_cont_500_bf_scaffold_130_11
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria
|
Not on your lists |
8510..9685
|
4-hydroxybenzoate 3-monooxygenase; K00481 p-hydroxybenzoate 3-monooxygenase [EC:1.14.13.2]
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:ABG04526.1}; EC=1.14.13.2 {ECO:0000313|EMBL:ABG04526.1};; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129).;"
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI00037EC061
rbh
|
|
SCNpilot_cont_500_bf_scaffold_130_12
Cupriavidus sp. HPC(L), Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9682..10686)
|
AraC family transcriptional regulator n=1 Tax=Cupriavidus sp. WS RepID=UPI00037F0A1E
rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:ESJ11782.1}; TaxID=1217418 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HPC(L).;"
bacterial regulatory helix-turn-helix s, AraC family protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_130_13
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(10745..12445)
|
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003041A28
rbh
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EIG62163.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
amidohydrolase; K07047
rbh
|
|
SCNpilot_cont_500_bf_scaffold_130_14
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
12529..12798
|
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9IUA5_BORPD
hypothetical protein; K09954 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAP43519.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
|
|
SCNpilot_cont_500_bf_scaffold_130_15
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(12806..13510)
|
GntR-family transcriptional regulator n=6 Tax=Bordetella bronchiseptica RepID=K0MTS3_BORBM
GntR family transcriptional regulator
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
SCNpilot_cont_500_bf_scaffold_130_16
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13711..14691
|
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8U1X5_ALIDB
protein bugT-like
Uncharacterized protein {ECO:0000313|EMBL:ADV01228.1}; Flags: Precursor;; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC).;"
|
|
SCNpilot_cont_500_bf_scaffold_130_17
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
14700..15320
|
Dimethylmenaquinone methyltransferase n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YQB9_9BURK
Dimethylmenaquinone methyltransferase
Dimethylmenaquinone methyltransferase {ECO:0000313|EMBL:ADX59312.1}; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
|
|
SCNpilot_cont_500_bf_scaffold_130_18
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15347..16618
|
leuC1; 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit LeuC n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RE90_9RHOB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
SCNpilot_cont_500_bf_scaffold_130_19
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
16615..17154
|
leuD3; 3-isopropylmalate dehydratase small subunit LeuD (EC:4.2.1.33 4.2.1.35)
3-isopropylmalate dehydratase small subunit LeuD n=1 Tax=Octadecabacter antarcticus 307 RepID=M9RFY4_9RHOB
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
|
|
SCNpilot_cont_500_bf_scaffold_130_20
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17187..17579
|
Putative uncharacterized protein nbaX n=1 Tax=Pseudomonas fluorescens RepID=Q83V32_PSEFL
endoribonuclease L-PSP
Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
|
|
SCNpilot_cont_500_bf_scaffold_130_21
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
17690..18679
|
Putative molybdopterin-dependent oxidoreductase n=1 Tax=Acidovorax sp. CF316 RepID=J0KNE9_9BURK
Putative molybdopterin-dependent oxidoreductase {ECO:0000313|EMBL:EJE52728.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
signal peptide
|
|
SCNpilot_cont_500_bf_scaffold_130_22
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(18695..19504)
|
Probable L-aspartate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01265}; EC=1.4.1.21 {ECO:0000256|HAMAP-Rule:MF_01265};; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
L-aspartate dehydrogenase; K06989 aspartate dehydrogenase [EC:1.4.1.21]
Probable L-aspartate dehydrogenase n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2LRX1_9RHIZ
|
|
SCNpilot_cont_500_bf_scaffold_130_23
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(19501..20310)
|
Regulatory protein IclR n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MIK8_9RHIZ
Regulatory protein IclR {ECO:0000313|EMBL:EKF20540.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
transcriptional regulator
|
|
SCNpilot_cont_500_bf_scaffold_130_24
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
20486..21520
|
TRAP dicarboxylate transporter subunit DctP n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MEE8_9RHIZ
rbh
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:EKF20541.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
TRAP dicarboxylate transporter DctP subunit
|
|
SCNpilot_cont_500_bf_scaffold_130_25
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
21540..22031
|
Uncharacterized protein n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2MT62_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:EKF20542.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
TRAP dicarboxylate family transporter subunit DctQ
|
|
SCNpilot_cont_500_bf_scaffold_130_26
Nitratireductor pacificus, Nitratireductor, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
22045..23349
|
TRAP dicarboxylate transporter subunit DctM n=1 Tax=Nitratireductor pacificus pht-3B RepID=K2N8W0_9RHIZ
rbh
TRAP dicarboxylate transporter subunit DctM {ECO:0000313|EMBL:EKF20543.1}; TaxID=391937 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Nitratireductor.;" source="Nitratireductor pacificus pht-3B.;"
TRAP C4-dicarboxylate transporter permease DctM
|
|
SCNpilot_cont_500_bf_scaffold_130_27
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
23369..24307
|
Uncharacterized protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R2W3_PIRSD
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KCB39411.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_130_28
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
24300..25658
|
probabable amidase; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]
Amidase n=6 Tax=Rhizobium meliloti RepID=F6BUX2_SINMB
Uncharacterized protein {ECO:0000313|EMBL:KDP70796.1}; TaxID=106592 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens (Sinorhizobium morelense).;"
|
|
SCNpilot_cont_500_bf_scaffold_130_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(25667..25981)
|
Membrane protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KQV4_STEMA
Membrane protein {ECO:0000313|EMBL:EQM80806.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;" source="Stenotrophomonas maltophilia MF89.;"
putative transmembrane protein
|
|
SCNpilot_cont_500_bf_scaffold_130_30
Burkholderia sacchari, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26086..27867
|
Putative lipoprotein n=1 Tax=Candidatus Glomeribacter gigasporarum BEG34 RepID=G2J9M7_9BURK
rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD17387.1}; TaxID=159450 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sacchari.;"
hypothetical protein
rbh
|