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SCNpilot_cont_500_bf_scaffold_195

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Displaying items 1-30 of 280 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_195_1
Burkholderia ubonensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..220)
DNA (219bp) protein (73aa)
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; K00121 S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]
S-(hydroxymethyl)glutathione dehydrogenase {ECO:0000256|RuleBase:RU362016}; EC=1.1.1.284 {ECO:0000256|RuleBase:RU362016};; TaxID=1249668 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia ubonensis MSMB22.;"
S-(Hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase n=1 Tax=Burkholderia phymatum (strain DSM 17167 / STM815) RepID=B2JDF8_BURP8
SCNpilot_cont_500_bf_scaffold_195_2
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(377..1729)
DNA (1353bp) protein (451aa)
Amino-acid acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01105}; EC=2.3.1.1 {ECO:0000256|HAMAP-Rule:MF_01105};; N-acetylglutamate synthase {ECO:0000256|HAMAP-Rule:MF_01105}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
Amino-acid acetyltransferase n=3 Tax=Bordetella bronchiseptica RepID=K0MVR7_BORBM rbh
argA; amino-acid acetyltransferase rbh
SCNpilot_cont_500_bf_scaffold_195_3
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1768..5619
DNA (3852bp) protein (1284aa)
ATP-dependent helicase HrpA {ECO:0000313|EMBL:KCB40461.1}; EC=3.6.4.- {ECO:0000313|EMBL:KCB40461.1};; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
hrpA; ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] rbh
ATP-dependent helicase HrpA n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HGJ9_ACHXA rbh
SCNpilot_cont_500_bf_scaffold_195_4
Bordetella hinzii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5625..6005)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003789836
Thioredoxin domain protein {ECO:0000313|EMBL:KCB41487.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 5132.;"
thiol-disulfide isomerase and thioredoxins family protein
SCNpilot_cont_500_bf_scaffold_195_5
Achromobacter insuavis, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6089..6868
DNA (780bp) protein (260aa)
Membrane protein 9 n=1 Tax=Achromobacter xylosoxidans AXX-A RepID=F7T2L8_ALCXX rbh
Membrane protein 9 {ECO:0000313|EMBL:EGP45402.1}; TaxID=1003200 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter insuavis AXX-A.;"
inner membrane protein rbh
SCNpilot_cont_500_bf_scaffold_195_6
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6865..7677
DNA (813bp) protein (271aa)
Uncharacterized protein n=2 Tax=Bordetella bronchiseptica RepID=K0MM16_BORBM rbh
hypothetical protein rbh
Molybdopterin-binding domain protein {ECO:0000313|EMBL:KDD62828.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_500_bf_scaffold_195_7
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7583..8302)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GPK2_PUSST
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEC20522.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
SCNpilot_cont_500_bf_scaffold_195_8
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8551..9582
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3R4M6_CUPTR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAQ69259.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus taiwanensis (strain R1 / LMG 19424) (Ralstonia taiwanensis; (strain LMG 19424)).;"
SCNpilot_cont_500_bf_scaffold_195_9
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9688..10683
DNA (996bp) protein (332aa)
Extra-cytoplasmic solute receptor family protein 20 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HJP3_ACHXA rbh
extra-cytoplasmic solute receptor family protein 20 rbh
Extra-cytoplasmic solute receptor family protein 20 {ECO:0000313|EMBL:ADP14368.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_500_bf_scaffold_195_10
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10877..11941
DNA (1065bp) protein (355aa)
Class A beta-lactamase {ECO:0000313|EMBL:KCV66321.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KCV66321.1};; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
pbpG; D-alanyl-D-alanine carboxypeptidase (EC:3.4.99.-); K07262 D-alanyl-D-alanine endopeptidase (penicillin-binding protein 7) [EC:3.4.21.-] rbh
Class A beta-lactamase n=17 Tax=Bordetella pertussis RepID=V8UZY6_BORPT rbh
SCNpilot_cont_500_bf_scaffold_195_11
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12004..12915)
DNA (912bp) protein (304aa)
Probable LysR-family transcriptional regulator n=4 Tax=Bordetella RepID=K4QGN0_BORBO rbh
LysR family transcriptional regulator rbh
Probable LysR-family transcriptional regulator {ECO:0000313|EMBL:CCN23477.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
SCNpilot_cont_500_bf_scaffold_195_12
Herbaspirillum sp. YR522, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13030..13770
DNA (741bp) protein (247aa)
Uncharacterized protein n=1 Tax=Herbaspirillum sp. YR522 RepID=J3HR24_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJN03256.1}; TaxID=1144342 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. YR522.;"
dehydrogenase with different specificities rbh
SCNpilot_cont_500_bf_scaffold_195_13
Achromobacter arsenitoxydans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13799..14626)
DNA (828bp) protein (276aa)
Transcriptional regulator family protein 6 n=1 Tax=Achromobacter arsenitoxydans SY8 RepID=H0F1K2_9BURK rbh
Transcriptional regulator family protein 6 {ECO:0000313|EMBL:EHK67880.1}; TaxID=477184 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter arsenitoxydans SY8.;"
transcriptional regulator family protein 6 rbh
SCNpilot_cont_500_bf_scaffold_195_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14825..15868)
DNA (1044bp) protein (348aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00054567}; EC=1.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00225, ECO:0000256|SAAS:SAAS00084821};; DHOdehase {ECO:0000256|HAMAP-Rule:MF_00225}; Dihydroorotate oxidase {ECO:0000256|HAMAP-Rule:MF_00225}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
Dihydroorotate dehydrogenase (quinone) n=8 Tax=Bordetella RepID=PYRD_BORBR rbh
pyrD; dihydroorotate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_195_15
Janthinobacterium lividum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15883..16710)
DNA (828bp) protein (276aa)
Putative arginyl-tRNA--protein transferase {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194293}; Short=Arginyltransferase {ECO:0000256|HAMAP-Rule:MF_00689};; Short=R-transferase {ECO:0000256|HAMAP-Rule:MF_00689};; EC=2.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00689, ECO:0000256|SAAS:SAAS00194290};; TaxID=29581 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobacterium lividum.;"
arginyl-tRNA-protein transferase (EC:2.3.2.8); K00685 arginine-tRNA-protein transferase [EC:2.3.2.8] rbh
arginyl-tRNA-protein transferase n=1 Tax=Janthinobacterium lividum RepID=UPI00028972A2 rbh
SCNpilot_cont_500_bf_scaffold_195_16
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16718..17473)
DNA (756bp) protein (252aa)
aat; leucyl/phenylalanyl-tRNA--protein transferase (EC:2.3.2.6); K00684 leucyl/phenylalanyl-tRNA--protein transferase [EC:2.3.2.6] rbh
Leucyl/phenylalanyl-tRNA--protein transferase {ECO:0000255|HAMAP-Rule:MF_00688}; EC=2.3.2.6 {ECO:0000255|HAMAP-Rule:MF_00688};; L/F-transferase {ECO:0000255|HAMAP-Rule:MF_00688}; Leucyltransferase {ECO:0000255|HAMAP-Rule:MF_00688}; Phenyalanyltransferase {ECO:0000255|HAMAP-Rule:MF_00688}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
Leucyl/phenylalanyl-tRNA--protein transferase n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=LFTR_BORPD rbh
SCNpilot_cont_500_bf_scaffold_195_17
Bordetella petrii, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17491..18108)
DNA (618bp) protein (206aa)
MutT/nudix family protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9I8M9_BORPD
MutT/nudix family protein
MutT/nudix family protein {ECO:0000313|EMBL:CAP41266.1}; TaxID=340100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448).;"
SCNpilot_cont_500_bf_scaffold_195_18
Pandoraea vervacti, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18170..19117)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E9EE2C
LysR family transcriptional regulator {ECO:0000313|EMBL:AJP57566.1}; TaxID=656178 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea vervacti.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_195_19
Burkholderia mallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19203..20837
DNA (1635bp) protein (545aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Acidovorax sp. CF316 RepID=J0KJZ3_9BURK
FAD binding domain protein {ECO:0000313|EMBL:KGC11731.1}; TaxID=13373 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia mallei (Pseudomonas mallei).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_195_20
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20886..21884
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Acidovorax sp. CF316 RepID=J0U9H9_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJE52862.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_195_21
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21917..22960
DNA (1044bp) protein (348aa)
Putative TIM-barrel fold metal-dependent hydrolase n=1 Tax=Acidovorax sp. CF316 RepID=J1EKY1_9BURK rbh
Putative TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:EJE52859.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
amidohydrolase 2
SCNpilot_cont_500_bf_scaffold_195_22
Cupriavidus sp. HMR-1, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22981..23946
DNA (966bp) protein (322aa)
ABC transporter substrate-binding protein n=1 Tax=Cupriavidus sp. HMR-1 RepID=L2E9K8_9BURK
bugT; ABC transporter substrate-binding protein
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EKZ96035.1}; TaxID=1249621 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. HMR-1.;"
SCNpilot_cont_500_bf_scaffold_195_23
Mycobacterium triplex, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

23956..24891
DNA (936bp) protein (312aa)
Extradiol dioxygenase n=2 Tax=Actinomycetales RepID=B6EUK9_9MICO
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:CDO91583.1}; TaxID=47839 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium triplex.;"
Glyoxalase/bleomycin resistance protein/dioxygenase
SCNpilot_cont_500_bf_scaffold_195_24
Burkholderia sp. MSh2, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24903..25772
DNA (870bp) protein (290aa)
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC:5.3.3.10) rbh
5-carboxymethyl-2-hydroxymuconate delta-isomerase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q473C0_CUPPJ rbh
5-carboxymethyl-2-hydroxymuconate isomerase {ECO:0000313|EMBL:KEZ07298.1}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
SCNpilot_cont_500_bf_scaffold_195_25
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25794..26729
DNA (936bp) protein (312aa)
UPI0003CEEF0E related cluster n=1 Tax=unknown RepID=UPI0003CEEF0E
3-keto-5-aminohexanoate cleavage protein {ECO:0000313|EMBL:KJK22682.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_195_trna_1
unknown

Not on your lists

26780..26853
DNA (74bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_195_26
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27375..29411)
DNA (2037bp) protein (679aa)
Uncharacterized protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6F2_AZOS1 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAI76231.1}; TaxID=137722 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum sp. (strain B510).;"
SCNpilot_cont_500_bf_scaffold_195_27
Pseudomonas sp. M1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29559..30353)
DNA (795bp) protein (265aa)
Putative GGDEF domain protein n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1I249_PSEUO
Diguanylate cyclase {ECO:0000313|EMBL:ETM64361.1}; TaxID=95619 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. (strain M1).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_195_28
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30365..30742)
DNA (378bp) protein (126aa)
Uncharacterized protein n=71 Tax=Pseudomonas RepID=G4LDC0_PSEAI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETD57158.1}; TaxID=1431713 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa VRFPA07.;"
SCNpilot_cont_500_bf_scaffold_195_29
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30761..31303)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BL04 RepID=U8M2K0_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:ERV74158.1}; TaxID=1402545 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa BL04.;"
hypothetical protein
Displaying items 1-30 of 280 in total

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