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SCNpilot_cont_500_bf_scaffold_515

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_515_1
unknown

Not on your lists

comp(1..78)
DNA (78bp) protein (26aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_515_2
R_Burkholderiales_63_240, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134..2236)
DNA (2103bp) protein (701aa)
Elongation factor G n=1 Tax=Achromobacter xylosoxidans NH44784-1996 RepID=R4XWG0_ALCXX rbh
Translation elongation factor G rbh
Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_63_240_curated
SCNpilot_cont_500_bf_scaffold_515_3
Castellaniella defragrans, Castellaniella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2315..2785)
DNA (471bp) protein (157aa)
30S ribosomal protein S7 n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXL1_PUSST
hypothetical protein; K02992 small subunit ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;"
SCNpilot_cont_500_bf_scaffold_515_4
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2938..3315)
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=1 Tax=Advenella kashmirensis W13003 RepID=V8QUD3_9BURK
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU003623}; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="Basilea psittacipulmonis DSM 24701.;"
rpsL; 30S ribosomal protein S12
SCNpilot_cont_500_bf_scaffold_515_5
Cyanobium sp. CACIAM 14, Cyanobium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(3735..4961)
DNA (1227bp) protein (409aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000305DA8C rbh
NADH dehydrogenase {ECO:0000313|EMBL:KEF43333.1}; TaxID=1496688 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobium.;" source="Cyanobium sp. CACIAM 14.;"
NADH dehydrogenase, FAD-containing subunit rbh
SCNpilot_cont_500_bf_scaffold_515_6
Pandoraea pnomenusa, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5000..5740)
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002E2E3A2 rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHQ99271.1}; TaxID=93220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa.;"
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1
SCNpilot_cont_500_bf_scaffold_515_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5733..6482)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D41DFB rbh
branched-chain amino acid ABC transporter,ATP-binding component
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_515_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6475..7512)
DNA (1038bp) protein (346aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002DE357C rbh
Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_515_9
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7509..8471)
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00031B03A8 rbh
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_515_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8440..9627)
DNA (1188bp) protein (396aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0003118045 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGH10165.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
extracellular ligand-binding receptor 6; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_515_11
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9811..10281
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI000369BDF0
BadM/Rrf2 family transcriptional regulator {ECO:0000313|EMBL:ELQ79298.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp. rimosus ATCC 10970.;"
transcriptional regulator
SCNpilot_cont_500_bf_scaffold_515_12
Pigmentiphaga sp. DL-8, Pigmentiphaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10441..11904
DNA (1464bp) protein (488aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1481731 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pigmentiphaga.;" source="Pigmentiphaga sp. DL-8.;"
Catalase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QMU1_9BURK
hypothetical protein
SCNpilot_cont_500_bf_scaffold_515_13
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12156..13142
DNA (987bp) protein (329aa)
Uncharacterized protein n=34 Tax=Bordetella RepID=F4LCZ0_BORPC rbh
Tripartite tricarboxylate transporter family receptor {ECO:0000313|EMBL:KCV62077.1}; TaxID=1331202 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 99-R-0433.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_515_14
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13173..14165
DNA (993bp) protein (331aa)
4,5-dihydroxyphthalate decarboxylase n=3 Tax=Bordetella bronchiseptica RepID=K0MLN7_BORBM rbh
4,5-dihydroxyphthalate decarboxylase rbh
NMT1/THI5 domain protein {ECO:0000313|EMBL:KDD59638.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_500_bf_scaffold_515_15
Bordetella parapertussis, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14173..15036
DNA (864bp) protein (288aa)
Molybdopterin dehydrogenase n=3 Tax=Bordetella bronchiseptica RepID=K0MMW3_BORBM rbh
molybdopterin dehydrogenase rbh
Molybdopterin dehydrogenase {ECO:0000313|EMBL:CAE35972.1}; TaxID=257311 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253).;"
SCNpilot_cont_500_bf_scaffold_515_16
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15045..15551
DNA (507bp) protein (169aa)
Probable 2Fe-2S ferredoxin n=2 Tax=Bordetella bronchiseptica RepID=K0MR37_BORBM
2Fe-2S ferredoxin
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:KDD59633.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
SCNpilot_cont_500_bf_scaffold_515_17
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15541..17916
DNA (2376bp) protein (792aa)
dehydrogenase/oxidase; K03520 carbon-monoxide dehydrogenase large subunit [EC:1.2.99.2] rbh
Probable dehydrogenase/oxidase n=1 Tax=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) RepID=Q7WQE1_BORBR rbh
Probable dehydrogenase/oxidase {ECO:0000313|EMBL:CCN21180.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
SCNpilot_cont_500_bf_scaffold_515_18
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17934..18722
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Bordetella bronchiseptica (strain MO149) RepID=K0MCP2_BORBM rbh
Carbon monoxide dehydrogenase subunit G CoxG {ECO:0000313|EMBL:KDD59631.1}; TaxID=1331242 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica OSU553.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_515_19
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18787..19095
DNA (309bp) protein (103aa)
Ferredoxin n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S0Z3_9BURK
Ferredoxin {ECO:0000313|EMBL:EHP43809.1}; TaxID=1127483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis OR16.;"
ferredoxin
SCNpilot_cont_500_bf_scaffold_515_20
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19079..20356
DNA (1278bp) protein (426aa)
pyridine nucleotide-disulphide oxidoreductase (EC:1.18.1.3); K00529 ferredoxin--NAD+ reductase [EC:1.18.1.3] rbh
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Ralstonia sp. GA3-3 RepID=R7XD82_9RALS rbh
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22750.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
SCNpilot_cont_500_bf_scaffold_515_21
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20379..21671
DNA (1293bp) protein (431aa)
ring hydroxylating subunit alpha family protein 2 (EC:1.14.12.-); K05708 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha [EC:1.14.12.19] rbh
Rieske [2Fe-2S] domain protein n=1 Tax=Achromobacter piechaudii ATCC 43553 RepID=D4XBG0_9BURK rbh
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG22749.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus basilensis.;"
SCNpilot_cont_500_bf_scaffold_515_22
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21668..22189
DNA (522bp) protein (174aa)
aromatic-ring-hydroxylating dioxygenase subunit beta; K05709 3-phenylpropionate/cinnamic acid dioxygenase subunit beta [EC:1.14.12.19]
Aromatic-ring-hydroxylating dioxygenase, beta subunit n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UQ1_CUPPJ
Dioxygenase {ECO:0000313|EMBL:KJK18151.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
SCNpilot_cont_500_bf_scaffold_515_23
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22201..23163
DNA (963bp) protein (321aa)
amidohydrolase; K14333 2,3-dihydroxybenzoate decarboxylase [EC:4.1.1.46] rbh
Amidohydrolase 2 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UP1_CUPPJ rbh
Amidohydrolase 2 {ECO:0000313|EMBL:AAZ63143.1}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
SCNpilot_cont_500_bf_scaffold_515_24
Pandoraea sputorum, Pandoraea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23255..24082
DNA (828bp) protein (276aa)
alpha/beta hydrolase; K15357 N-formylmaleamate deformylase [EC:3.5.1.106]
Alpha/beta hydrolase fold family protein 7 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HM84_ACHXA
Alpha/beta hydrolase {ECO:0000313|EMBL:AJC16706.1}; TaxID=93222 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea sputorum.;"
SCNpilot_cont_500_bf_scaffold_515_25
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24117..25148
DNA (1032bp) protein (344aa)
Uncharacterized protein n=3 Tax=Bordetella RepID=Q7TT89_BORPA rbh
2,5-dihydroxypyridine 5,6-dioxygenase {ECO:0000313|EMBL:KJK10759.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_515_26
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25162..25794
DNA (633bp) protein (211aa)
Isochorismatase hydrolase n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46UN7_CUPPJ rbh
N-carbamoylsarcosine amidase {ECO:0000313|EMBL:KDP86420.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
isochorismatase hydrolase rbh
SCNpilot_cont_500_bf_scaffold_515_27
Bordetella avium, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25885..26394
DNA (510bp) protein (170aa)
MarR-family transcriptional regulator n=1 Tax=Bordetella avium (strain 197N) RepID=Q2KW54_BORA1
MarR family transcriptional regulator
MarR-family transcriptional regulator {ECO:0000313|EMBL:CAJ50357.1}; TaxID=360910 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella avium (strain 197N).;"
SCNpilot_cont_500_bf_scaffold_515_28
bacterium YEK0313, Bacteria

Not on your lists

comp(26367..27614)
DNA (1248bp) protein (416aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00036C5387 rbh
HTH-type transcriptional regulator GbpR {ECO:0000313|EMBL:CEJ14033.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
transcription factor transcription regulator protein
SCNpilot_cont_500_bf_scaffold_515_29
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27614..28279)
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002D8E209
isochorismatase hydrolase
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
SCNpilot_cont_500_bf_scaffold_515_30
Bordetella sp. 10d, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28292..28825)
DNA (534bp) protein (178aa)
hypothetical protein; K00452 3-hydroxyanthranilate 3,4-dioxygenase [EC:1.13.11.6]
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI00036E1C97
4-amino-3-hydroxybenzoate 2,3-dioxygenase {ECO:0000313|EMBL:BAD08206.1}; TaxID=170622 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella sp. 10d.;"
Displaying items 1-30 of 60 in total

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