ggKbase home page

SCNpilot_cont_500_bf_scaffold_21_15

Organism: SCNPILOT_CONT_300_BF_Burkholderiales_67_33

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: comp(18393..18917)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARV3_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 66.2
  • Coverage: 160.0
  • Bit_score: 211
  • Evalue 8.30e-52
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 160.0
  • Bit_score: 211
  • Evalue 2.60e-52
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF87739.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.2
  • Coverage: 160.0
  • Bit_score: 211
  • Evalue 1.20e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 525
ATGCCCGCCACCTCCCCGCGCGAGGATGCCCTCTCCAGCCTCTACGCCAGCCATCATGGCTGGCTGCAGGGCTGGCTGCGCCGCCGGCTGGGATGCCGCTTCGATGCGGCCGACATCGCCCACGACACCTTCGTGCGCGTGCTCAAGGCGTGCAACGCCGCGGACATCCGCGAACCGCGCGACTACCTCGCCACCATCGCCAAGGGCCTGGTGGTGGATTTCTACCGGCGGGCCGCGCTGGAACGGGCCTACCTGGACGTGCTCGCCTCCCTGCCCCAGGCGCACCAGCCCTCGGTCGAAGAACGCGCCCTGGTCATGGAAGCGCTGGCGCAGGTCGATGCCATGTTGTCGGGCCTGCCGGCCAGGGTCAGGCAGGCTTTCATCATGTCCCAGCTCGAAGGGCTCACCTACGCAGAGATCGCCGCGCAATTGGACGTGACCGTGCGCACGGTCAACAACTACATGGTGAAGGCGCTCGAACGCTGCTACCTGGCCGTGGCGGCCCAGGAACGCCTCACGCCATGA
PROTEIN sequence
Length: 175
MPATSPREDALSSLYASHHGWLQGWLRRRLGCRFDAADIAHDTFVRVLKACNAADIREPRDYLATIAKGLVVDFYRRAALERAYLDVLASLPQAHQPSVEERALVMEALAQVDAMLSGLPARVRQAFIMSQLEGLTYAEIAAQLDVTVRTVNNYMVKALERCYLAVAAQERLTP*