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SCNpilot_cont_500_bf_scaffold_21

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Displaying items 1-30 of 717 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_21_1
Aquitalea magnusonii, Aquitalea, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1595
DNA (1593bp) protein (531aa)
YD repeat protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1NZX4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJV25780.1}; TaxID=332411 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Chromobacteriaceae; Aquitalea.;" source="Aquitalea magnusonii.;"
SCNpilot_cont_500_bf_scaffold_21_2
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1556..4366
DNA (2811bp) protein (937aa)
Rhs family protein n=1 Tax=Burkholderia cenocepacia H111 RepID=G7HQH9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KAK47825.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
SCNpilot_cont_500_bf_scaffold_21_3
Burkholderia jiangsuensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4356..7673
DNA (3318bp) protein (1106aa)
Uncharacterized protein (Fragment) n=1 Tax=Acinetobacter pittii ANC 4052 RepID=R8YX21_ACIPI rbh
Uncharacterized protein {ECO:0000313|EMBL:KAK47825.1}; TaxID=1458357 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia jiangsuensis.;"
peptidoglycan-binding lysin domain-containing protein
SCNpilot_cont_500_bf_scaffold_21_4
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7670..7948
DNA (279bp) protein (93aa)
Uroporphyrinogen-III synthase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H7U8_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig175, whole genome shotgun sequence {ECO:0000313|EMBL:KIU48874.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_21_5
Burkholderia ambifaria, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8231..8416
DNA (186bp) protein (62aa)
Transposase mutator type n=1 Tax=Burkholderia ambifaria (strain MC40-6) RepID=B1YRM3_BURA4
transposase mutator type
Transposase mutator type {ECO:0000313|EMBL:ACB64297.1}; TaxID=398577 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain MC40-6).;"
SCNpilot_cont_500_bf_scaffold_21_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9085..10005)
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI000302C690
Alpha/beta hydrolase fold-3 domain protein {ECO:0000313|EMBL:ELZ54063.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;"
putative lipase/esterase
SCNpilot_cont_500_bf_scaffold_21_7
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10002..10610)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GQV5_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN90503.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;"
SCNpilot_cont_500_bf_scaffold_21_8
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10639..11610)
DNA (972bp) protein (324aa)
MFS transporter n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00036FB2F4
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
SCNpilot_cont_500_bf_scaffold_21_9
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11752..12681
DNA (930bp) protein (310aa)
Probable LysR-family transcription regulator n=1 Tax=Bordetella bronchiseptica 1289 RepID=K4U3N2_BORBO
Probable LysR-family transcription regulator {ECO:0000313|EMBL:CCN23581.1}; TaxID=1208657 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica 1289.;"
LysR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_21_10
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12753..13154
DNA (402bp) protein (134aa)
Endoribonuclease L-PSP family protein 16 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HU99_ACHXA
endoribonuclease L-PSP family protein
Endoribonuclease L-PSP family protein 16 {ECO:0000313|EMBL:ADP19809.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_500_bf_scaffold_21_11
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13157..14113
DNA (957bp) protein (319aa)
Extra-cytoplasmic solute receptor family protein 182 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HUA1_ACHXA rbh
extra-cytoplasmic solute receptor family protein 182 rbh
Extra-cytoplasmic solute receptor family protein 182 {ECO:0000313|EMBL:ADP19811.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_500_bf_scaffold_21_12
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14177..14863
DNA (687bp) protein (229aa)
Bacterial regulatory protein, GntR family protein 72 n=1 Tax=Achromobacter xylosoxidans (strain A8) RepID=E3HUA2_ACHXA
GntR family transcriptional regulator
Bacterial regulatory protein, GntR family protein 72 {ECO:0000313|EMBL:ADP19812.1}; TaxID=762376 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter xylosoxidans (strain A8).;"
SCNpilot_cont_500_bf_scaffold_21_13
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14873..17350)
DNA (2478bp) protein (826aa)
Ferrichrome-iron transporter n=1 Tax=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) RepID=B9JL86_AGRRK rbh
Ferrichrome-iron receptor {ECO:0000313|EMBL:KGM31998.1}; Flags: Fragment;; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
fhuA; ferrichrome-iron transporter; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_21_14
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17425..18396)
DNA (972bp) protein (324aa)
Anti-FecI sigma factor FecR n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6Y8A1_9RHOO
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:ENO90496.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera linaloolentis 47Lol = DSM 12138.;"
anti-FecI sigma factor FecR; K07165 transmembrane sensor
SCNpilot_cont_500_bf_scaffold_21_15
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18393..18917)
DNA (525bp) protein (175aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6ARV3_DELSC
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:AEF87739.1}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;"
SCNpilot_cont_500_bf_scaffold_21_16
Cupriavidus sp. SK-3, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19077..19772
DNA (696bp) protein (232aa)
Diguanylate cyclase with pas pac and gaf sensor n=1 Tax=Ralstonia sp. PBA RepID=I9KXY1_9RALS
Uncharacterized protein {ECO:0000313|EMBL:KDP89468.1}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-3.;"
sensor/regulator protein
SCNpilot_cont_500_bf_scaffold_21_17
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19885..20601
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IVG1_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KJK15450.1}; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae bacterium 16.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_21_18
Burkholderia oklahomensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20612..23197
DNA (2586bp) protein (862aa)
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI00035E9CA6 rbh
B12 binding domain protein {ECO:0000313|EMBL:AIO70769.1}; TaxID=342113 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Burkholderia oklahomensis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_21_19
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23197..23832
DNA (636bp) protein (212aa)
OmpA/MotB domain protein n=1 Tax=Burkholderia sp. H160 RepID=B5WN03_9BURK rbh
OmpA family protein {ECO:0000313|EMBL:AJZ63674.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_21_20
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23840..24427
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IVF8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF34710.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_21_21
Achromobacter piechaudii, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24540..25295
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Achromobacter piechaudii HLE RepID=J4P279_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EJO27807.1}; TaxID=1156919 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter piechaudii HLE.;"
Probable transmembrane protein rbh
SCNpilot_cont_500_bf_scaffold_21_22
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25315..26496)
DNA (1182bp) protein (394aa)
hypothetical protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F2D254 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KGH10165.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_21_23
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26682..27587
DNA (906bp) protein (302aa)
Transcriptional regulator LysR family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GV80_CUPNN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EYS97961.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
LysR family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_21_24
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27611..28507)
DNA (897bp) protein (299aa)
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GW24_CUPNN rbh
2-keto-4-pentenoate hydratase rbh
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase {ECO:0000313|EMBL:AEI82713.1}; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
SCNpilot_cont_500_bf_scaffold_21_25
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28504..29037)
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QIA6_RALPI
Uncharacterized protein {ECO:0000313|EMBL:EYS97966.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_21_26
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29073..30101)
DNA (1029bp) protein (343aa)
ascD3; CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD (EC:1.17.1.-) rbh
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD {ECO:0000313|EMBL:AEI82711.1}; EC=1.17.1.- {ECO:0000313|EMBL:AEI82711.1};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) (Ralstonia; eutropha).;"
CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehydrase reductase AscD n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GW22_CUPNN rbh
SCNpilot_cont_500_bf_scaffold_21_27
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30393..31139
DNA (747bp) protein (249aa)
GntR family transcriptional regulator n=1 Tax=Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001) RepID=I3UAA3_ADVKW
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:AFK61941.1}; TaxID=1036672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis (strain DSM 17095 / LMG 22695 / WT001); (Tetrathiobacter kashmirensis).;"
SCNpilot_cont_500_bf_scaffold_21_28
Variovorax sp. CF313, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31174..32913)
DNA (1740bp) protein (580aa)
Tannase and feruloyl esterase; K09252 feruloyl esterase [EC:3.1.1.73] rbh
Tannase and feruloyl esterase n=1 Tax=Variovorax sp. CF313 RepID=J3CHV8_9BURK
Tannase and feruloyl esterase {ECO:0000313|EMBL:EJL71929.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;"
SCNpilot_cont_500_bf_scaffold_21_29
Advenella kashmirensis, Advenella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33126..34157
DNA (1032bp) protein (344aa)
Taurine catabolism dioxygenase TauD, TfdA family n=1 Tax=Advenella kashmirensis W13003 RepID=V8QKA1_9BURK rbh
Taurine catabolism dioxygenase TauD, TfdA family {ECO:0000313|EMBL:ETF00376.1}; TaxID=1424334 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae.;" source="Advenella kashmirensis W13003.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_21_30
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34168..35139
DNA (972bp) protein (324aa)
Putative exported protein n=4 Tax=Bordetella RepID=K4QKA5_BORBO rbh
hypothetical protein rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
Displaying items 1-30 of 717 in total

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