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SCNpilot_cont_500_bf_scaffold_2764

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_2764_1
Pelagibacterium halotolerans, Pelagibacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..315)
DNA (315bp) protein (105aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9]
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=1082931 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Pelagibacterium.;" source="Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2).;"
thioredoxin reductase n=1 Tax=Methylocystis parvus RepID=UPI0002FAADB2
SCNpilot_cont_500_bf_scaffold_2764_2
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(443..1351)
DNA (909bp) protein (303aa)
Protein tyrosine phosphatase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IMD9_XANP2
protein tyrosine phosphatase
Protein tyrosine phosphatase {ECO:0000313|EMBL:ABS69182.1}; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_2764_3
Ochrobactrum tritici, Ochrobactrum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1475..1774
DNA (300bp) protein (100aa)
ArsR1 n=1 Tax=Ochrobactrum tritici RepID=A1XP68_9RHIZ
ArsR1 {ECO:0000313|EMBL:ABF22608.1}; TaxID=94626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Ochrobactrum.;" source="Ochrobactrum tritici.;"
regulatory protein ArsR
SCNpilot_cont_500_bf_scaffold_2764_4
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1786..2847
DNA (1062bp) protein (354aa)
Arsenical-resistance protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JAB3_OLICO
arsenite efflux pump protein; K03325 arsenite transporter, ACR3 family
Putative arsenite efflux pump protein {ECO:0000313|EMBL:AEI05015.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_2764_5
unknown

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2844..3047
DNA (204bp) protein (68aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2764_6
unknown

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3164..3760
DNA (597bp) protein (199aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_2764_7
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3886..4761
DNA (876bp) protein (292aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031FA124
phosphate/phosphonate ABC transporter; K02044 phosphonate transport system substrate-binding protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABS69170.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_2764_8
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4766..6220
DNA (1455bp) protein (485aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00031227D3 rbh
integral membrane sensor signal transduction histidine kinase rbh
SCNpilot_cont_500_bf_scaffold_2764_9
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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6210..7529
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002DA86D9 rbh
two component sigma-54 specific Fis family transcriptional regulator rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ADH88603.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_cont_500_bf_scaffold_2764_10
Xanthobacter autotrophicus, Xanthobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7705..8226
DNA (522bp) protein (174aa)
arsenite oxidase small subunit; K08355 arsenite oxidase small subunit [EC:1.20.9.1]
arsenite oxidase small subunit n=1 Tax=Chelatococcus sp. GW1 RepID=UPI00035CDD3B
Arsenite oxidase small subunit {ECO:0000313|EMBL:ABS69173.1}; Flags: Precursor;; TaxID=78245 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Xanthobacter.;" source="Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2).;"
SCNpilot_cont_500_bf_scaffold_2764_11
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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8238..10742
DNA (2505bp) protein (835aa)
arsenite oxidase large subunit (EC:1.20.98.1); K08356 arsenite oxidase large subunit [EC:1.20.9.1] rbh
Arsenite oxidase, large subunit {ECO:0000313|EMBL:ADH88601.1}; EC=1.20.9.1 {ECO:0000313|EMBL:ADH88601.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
arsenite oxidase large subunit n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002F9BF7C rbh
SCNpilot_cont_500_bf_scaffold_2764_12
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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10811..12097
DNA (1287bp) protein (429aa)
MoeA-like molybdopterin cofactor biosynthesis protein; K03750 molybdopterin molybdotransferase [EC:2.10.1.1]
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003172C87 rbh
Molybdopterin biosynthesis enzyme {ECO:0000313|EMBL:EIG62867.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
SCNpilot_cont_500_bf_scaffold_2764_13
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12121..12516
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Chelatococcus sp. GW1 RepID=UPI0002E1747A
Cytochrome c2 {ECO:0000313|EMBL:EGP08397.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
cycA; cytochrome c550; K08738 cytochrome c
SCNpilot_cont_500_bf_scaffold_2764_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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12633..13367
DNA (735bp) protein (245aa)
Transcriptional regulator, LuxR family n=3 Tax=Oligotropha carboxidovorans RepID=F8BQW8_OLICM
LuxR family transcriptional regulator
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:AEI08212.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_2764_15
Methylobacterium extorquens, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(13411..13941)
DNA (531bp) protein (177aa)
Conserved hypothethical protein, putative partition protein n=1 Tax=Methylobacterium extorquens (strain DSM 5838 / DM4) RepID=C7CAU9_METED
hypothetical protein
Conserved hypothethical protein, putative partition protein {ECO:0000313|EMBL:CAX24232.1}; TaxID=661410 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium extorquens (strain DSM 5838 / DM4) (Methylobacterium; dichloromethanicum (strain DM4)).;"
Displaying 15 items

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