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SCNpilot_cont_500_bf_scaffold_127

Search features with annotation key words

Displaying items 1-30 of 283 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_127_1
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68..742)
DNA (675bp) protein (225aa)
gph; phosphoglycolate phosphatase (EC:3.1.3.18); K01091 phosphoglycolate phosphatase [EC:3.1.3.18]
Phosphoglycolate phosphatase {ECO:0000256|SAAS:SAAS00077902}; EC=3.1.3.18 {ECO:0000256|SAAS:SAAS00077902};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Phosphoglycolate phosphatase Gph n=2 Tax=Oligotropha carboxidovorans RepID=F8BQN2_OLICM
SCNpilot_cont_500_bf_scaffold_127_2
Ensifer adhaerens, Ensifer, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(858..3194)
DNA (2337bp) protein (779aa)
salicylyl-CoA 5-hydroxylase; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40]
salicylyl-CoA 5-hydroxylase n=1 Tax=Hoeflea sp. 108 RepID=UPI00036BEFA3 rbh
Putative flavoprotein oxidoreductase {ECO:0000313|EMBL:AHK45989.1}; TaxID=1416753 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Ensifer.;" source="Ensifer adhaerens OV14.;"
SCNpilot_cont_500_bf_scaffold_127_3
bacterium YEK0313, Bacteria

Not on your lists

3410..4558
DNA (1149bp) protein (383aa)
Pilus assembly protein CpaD n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H5A7_9BRAD rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CEJ11756.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
acyl-CoA dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_127_4
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4687..6318)
DNA (1632bp) protein (544aa)
Benzoate-CoA ligase family n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QLS5_9BRAD rbh
Benzoate-CoA ligase family {ECO:0000313|EMBL:EIG60731.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
coenzyme A ligase rbh
SCNpilot_cont_500_bf_scaffold_127_5
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6315..7469)
DNA (1155bp) protein (385aa)
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2WP69_9BRAD rbh
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EJN14505.1}; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_127_6
Methylobacterium nodulans, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7595..8449
DNA (855bp) protein (285aa)
Transcriptional regulator, IclR family n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPX2_METNO
IclR family transcriptional regulator
Transcriptional regulator, IclR family {ECO:0000313|EMBL:ACL56622.1}; TaxID=460265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium nodulans (strain ORS2060 / LMG 21967).;"
SCNpilot_cont_500_bf_scaffold_127_7
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8480..9403)
DNA (924bp) protein (308aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00031C5CCD
Uncharacterized protein {ECO:0000313|EMBL:EKS39452.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_127_8
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9459..10406)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0003149D6B
Uncharacterized protein {ECO:0000313|EMBL:EKS39451.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
NAD-binding 3-hydroxyacyl-CoA dehydrogenase
SCNpilot_cont_500_bf_scaffold_127_9
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10485..13004)
DNA (2520bp) protein (840aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PIT6_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39450.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter-like protein
SCNpilot_cont_500_bf_scaffold_127_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13009..13881)
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PFB5_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS39449.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
SCNpilot_cont_500_bf_scaffold_127_11
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14145..15401)
DNA (1257bp) protein (419aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002E9BAB0 rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39448.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein rbh
SCNpilot_cont_500_bf_scaffold_127_12
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15584..16282
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI00030D3703
Uncharacterized protein {ECO:0000313|EMBL:EKS39447.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
GntR family transcriptional regulator
SCNpilot_cont_500_bf_scaffold_127_13
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16304..17080
DNA (777bp) protein (259aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002DF1BE8
Uncharacterized protein {ECO:0000313|EMBL:EKS39446.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
short-chain dehydrogenase/reductase SDR
SCNpilot_cont_500_bf_scaffold_127_14
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17253..18302
DNA (1050bp) protein (350aa)
selD; selenophosphate synthase SelD (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3] rbh
Selenophosphate synthase SelD {ECO:0000313|EMBL:AEI07493.1}; EC=2.7.9.3 {ECO:0000313|EMBL:AEI07493.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
Selenide, water dikinase n=2 Tax=Oligotropha carboxidovorans RepID=B6JC85_OLICO rbh
SCNpilot_cont_500_bf_scaffold_127_15
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18551..18970)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2W9_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07222.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_127_16
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18954..19430)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X0_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CEG07221.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_127_17
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19427..21511)
DNA (2085bp) protein (695aa)
Selenocysteine-specific translation elongation factor n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X1_9BRAD rbh
Selenocysteine-specific translation elongation factor {ECO:0000313|EMBL:EFI52301.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
selB2; selenocysteine-specific elongation factor SelB; K03833 selenocysteine-specific elongation factor rbh
SCNpilot_cont_500_bf_scaffold_127_trna_4
unknown

Not on your lists

comp(19449..19540)
DNA (92bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_127_18
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21511..22323)
DNA (813bp) protein (271aa)
Sel1-like repeat protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BMH0_OLICM rbh
Sel1-like repeat-containing protein; K07126 rbh
Sel1-like repeat protein {ECO:0000313|EMBL:AEI07497.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_127_19
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22323..23738)
DNA (1416bp) protein (472aa)
selA; selenocysteine synthase (EC:2.9.1.1); K01042 L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]
L-seryl-tRNA selenium transferase SelA {ECO:0000313|EMBL:AEI07498.1}; EC=2.9.1.1 {ECO:0000313|EMBL:AEI07498.1};; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
L-seryl-tRNA(Sec) selenium transferase n=2 Tax=Oligotropha carboxidovorans RepID=B6JC80_OLICO
SCNpilot_cont_500_bf_scaffold_127_20
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23749..24663)
DNA (915bp) protein (305aa)
Protein FdhE homolog n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUU7_AFIFE rbh
Protein FdhE homolog {ECO:0000256|HAMAP-Rule:MF_00611}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
fdhE; formate dehydrogenase accessory protein FdhE; K02380 FdhE protein rbh
SCNpilot_cont_500_bf_scaffold_127_21
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24755..25423)
DNA (669bp) protein (223aa)
Formate dehydrogenase, gamma subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X5_9BRAD
Formate dehydrogenase, gamma subunit {ECO:0000313|EMBL:EFI52305.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
formate dehydrogenase, gamma subunit; K00127 formate dehydrogenase, gamma subunit
SCNpilot_cont_500_bf_scaffold_127_22
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25420..26361)
DNA (942bp) protein (314aa)
Formate dehydrogenase, beta subunit n=1 Tax=Afipia felis ATCC 53690 RepID=K8NYF3_AFIFE rbh
Formate dehydrogenase, beta subunit {ECO:0000313|EMBL:EKS31208.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
fdoH; formate dehydrogenase-O iron-sulfur subunit FdoH; K00124 formate dehydrogenase, beta subunit rbh
SCNpilot_cont_500_bf_scaffold_127_23
Afipia sp. 1NLS2, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26375..28801)
DNA (2427bp) protein (809aa)
fdoG; formate dehydrogenase-O major subunit FdoG (EC:1.2.1.2) rbh
Formate dehydrogenase, alpha subunit n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X7_9BRAD rbh
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:EFI52307.1}; TaxID=666684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. 1NLS2.;"
SCNpilot_cont_500_bf_scaffold_127_24
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28850..29449)
DNA (600bp) protein (200aa)
fdoG; formate dehydrogenase-O major subunit FdoG (EC:1.2.1.2)
Molybdopterin oxidoreductase Fe4S4 region n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X8_9BRAD
Formate dehydrogenase-O major subunit {ECO:0000313|EMBL:CEG07214.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
SCNpilot_cont_500_bf_scaffold_127_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30024..30551
DNA (528bp) protein (176aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Afipia sp. 1NLS2 RepID=D6V2X9_9BRAD
Thiol-disulfide oxidoreductase ResA {ECO:0000313|EMBL:CEG07213.1}; TaxID=1035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis (Cat scratch disease bacillus).;"
thioredoxin family protein
SCNpilot_cont_500_bf_scaffold_127_26
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30577..31683
DNA (1107bp) protein (369aa)
Transglutaminase domain protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JC73_OLICO rbh
transglutaminase-like protein, TAT translocated rbh
Transglutaminase-like protein, TAT translocated {ECO:0000313|EMBL:AEI07504.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;"
SCNpilot_cont_500_bf_scaffold_127_27
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31748..32899
DNA (1152bp) protein (384aa)
Cysteine desulfurase n=1 Tax=Rhodovulum sp. PH10 RepID=J6IWM0_9RHOB rbh
Cysteine desulfurase {ECO:0000313|EMBL:EJW09755.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
cysteine desulfurase
SCNpilot_cont_500_bf_scaffold_127_28
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32907..35168)
DNA (2262bp) protein (754aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035E32A9 rbh
Kef-type K+ transport system, membrane component {ECO:0000313|EMBL:EHR05222.1}; Flags: Precursor;; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
sodium/hydrogen exchanger
SCNpilot_cont_500_bf_scaffold_127_29
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35396..35974)
DNA (579bp) protein (193aa)
Glutathione-dependent formaldehyde-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00723}; EC=4.4.1.22 {ECO:0000256|HAMAP-Rule:MF_00723};; S-(hydroxymethyl)glutathione synthase {ECO:0000256|HAMAP-Rule:MF_00723}; TaxID=1205753 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas translucens DAR61454.;"
glutathione-dependent formaldehyde-activating protein; K03396 S-(hydroxymethyl)glutathione synthase [EC:4.4.1.22]
Glutathione-dependent formaldehyde-activating enzyme n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GUJ2_XANCT
Displaying items 1-30 of 283 in total

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