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SCNpilot_cont_500_bf_scaffold_365

Search features with annotation key words

Displaying items 1-30 of 170 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_365_1
unknown

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_365_2
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

386..2113
DNA (1728bp) protein (576aa)
acetyl-CoA synthetase; K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32] rbh
Acetyl-CoA synthetase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DN27_BRAJP rbh
Putative acetyl-CoA synthetase {ECO:0000313|EMBL:EJZ31319.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
SCNpilot_cont_500_bf_scaffold_365_3
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2129..2611
DNA (483bp) protein (161aa)
Putative translation initiation inhibitor, yjgF family n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QQQ8_9BRAD
Putative translation initiation inhibitor, yjgF family {ECO:0000313|EMBL:EIG62114.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_365_4
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2814..3611)
DNA (798bp) protein (266aa)
Phosphohydrolase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IFC1_9BRAD rbh
Phosphohydrolase {ECO:0000313|EMBL:ERF81124.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_365_5
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3679..4845
DNA (1167bp) protein (389aa)
MFS transporter n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003736472 rbh
Dihydrolipoamide dehydrogenase {ECO:0000313|EMBL:ERF81123.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
major facilitator superfamily transporter rbh
SCNpilot_cont_500_bf_scaffold_365_6
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5312..5518)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3HXB5_9BRAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGJ67112.1}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
SCNpilot_cont_500_bf_scaffold_365_7
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5601..5894)
DNA (294bp) protein (98aa)
Excinuclease ABC, C subunit-like n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q210J0_RHOPB
excinuclease ABC subunit C
Excinuclease ABC, C subunit-like {ECO:0000313|EMBL:ABD89196.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_365_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6020..6406
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133Q0_RHOPS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE40689.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_365_9
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6734..7957)
DNA (1224bp) protein (408aa)
branched-chain amino acid ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036F1A3D rbh
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44305.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
putative ABC-type branched-chain amino acid transporter rbh
SCNpilot_cont_500_bf_scaffold_365_10
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8118..8951)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8PK26_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS39870.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
enoyl-CoA hydratase/isomerase rbh
SCNpilot_cont_500_bf_scaffold_365_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9338..10267
DNA (930bp) protein (310aa)
senescence marker protein-30 (SMP-30); K01053 gluconolactonase [EC:3.1.1.17] rbh
Gluconolactonase {ECO:0000313|EMBL:ABE40688.1}; EC=3.1.1.17 {ECO:0000313|EMBL:ABE40688.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
Gluconolactonase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q133Q1_RHOPS rbh
SCNpilot_cont_500_bf_scaffold_365_12
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10420..11013
DNA (594bp) protein (198aa)
GCN5-related N-acetyltransferase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IYU8_RHOP2 rbh
N-acetyltransferase GCN5 rbh
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABD06612.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
SCNpilot_cont_500_bf_scaffold_365_13
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11010..12683
DNA (1674bp) protein (558aa)
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IU39_9BRAD rbh
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:ERF86399.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
GMC type oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_365_14
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12964..13944)
DNA (981bp) protein (327aa)
ferredoxin; K03863 vanillate monooxygenase [EC:1.14.13.82] rbh
Ferredoxin n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VKV6_RHOPX rbh
Diguanylate cyclase {ECO:0000313|EMBL:KJC40357.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_500_bf_scaffold_365_15
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13963..14715)
DNA (753bp) protein (251aa)
GntR family transcriptional regulator n=1 Tax=Bradyrhizobium elkanii RepID=UPI0003081DED rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KJC40358.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
transcriptional regulator; K11475 GntR family transcriptional regulator, vanillate catabolism transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_365_16
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14719..15774)
DNA (1056bp) protein (352aa)
vanillate O-demethylase oxygenase subunit; K03862 vanillate monooxygenase [EC:1.14.13.82] rbh
Vanillate monooxygenase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IRV7_9BRAD rbh
Rieske (2Fe-2S) protein {ECO:0000313|EMBL:KJC40359.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
SCNpilot_cont_500_bf_scaffold_365_17
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15955..16797)
DNA (843bp) protein (281aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HPN6_9BRAD rbh
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ERF86401.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
ATPase rbh
SCNpilot_cont_500_bf_scaffold_365_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16899..17153)
DNA (255bp) protein (85aa)
Transglycosylase-associated protein n=2 Tax=Bradyrhizobiaceae RepID=F7QRC5_9BRAD
Transglycosylase-associated protein {ECO:0000313|EMBL:EGP06335.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
transglycosylase
SCNpilot_cont_500_bf_scaffold_365_19
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17420..18595
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TUH2_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:CCE10110.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
hypothetical protein; K09989 hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_365_20
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18598..19011
DNA (414bp) protein (138aa)
Rhodanese-like protein n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJB3_NITHX
rhodanese-like protein
Rhodanese-like protein {ECO:0000313|EMBL:ABE63684.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_365_21
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19156..20016
DNA (861bp) protein (287aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2]
3-mercaptopyruvate sulfurtransferase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJB4_NITHX
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_365_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20130..21191)
DNA (1062bp) protein (354aa)
hypothetical protein, partial n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B6E67E
Uncharacterized protein {ECO:0000313|EMBL:KIZ38818.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_365_23
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21637..22776
DNA (1140bp) protein (380aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WY60_9BRAD rbh
ErfK/YbiS/YcfS/YnhG {ECO:0000313|EMBL:EAQ35082.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_365_24
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23075..24031)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P7C7_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS36659.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
phosphoglycerate dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_365_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24140..24349)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07Q02_RHOP5
Uncharacterized protein {ECO:0000313|EMBL:KIZ38816.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_365_26
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24582..26531
DNA (1950bp) protein (650aa)
ChvD family ATP-binding cassette protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P242_9BRAD
ChvD family ATP-binding cassette protein {ECO:0000313|EMBL:EKS36657.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717.;"
ABC transporter ATP-binding protein
SCNpilot_cont_500_bf_scaffold_365_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26791..27561
DNA (771bp) protein (257aa)
trans-aconitate 2-methyltransferase; K00598 trans-aconitate 2-methyltransferase [EC:2.1.1.144] rbh
Trans-aconitate 2-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00560}; EC=2.1.1.144 {ECO:0000255|HAMAP-Rule:MF_00560};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
Trans-aconitate 2-methyltransferase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=TAM_RHOPB rbh
SCNpilot_cont_500_bf_scaffold_365_28
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27742..28329
DNA (588bp) protein (196aa)
UPF0114 protein RPE_2045 n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07PZ5_RHOP5 rbh
hypothetical protein rbh
UPF0114 protein RPE_2045 {ECO:0000256|HAMAP-Rule:MF_00143}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_500_bf_scaffold_365_29
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28326..29582
DNA (1257bp) protein (419aa)
Lytic murein transglycosylase n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJC2_NITHX
lytic murein transglycosylase
Lytic murein transglycosylase {ECO:0000313|EMBL:ABE63675.1}; Flags: Precursor;; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;"
SCNpilot_cont_500_bf_scaffold_365_30
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29791..30075)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002D96B6C
Bradyrhizobium elkanii strain UASWS1015 Contig185, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44605.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
hypothetical protein
Displaying items 1-30 of 170 in total

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