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SCNpilot_cont_500_bf_scaffold_373

Search features with annotation key words

Displaying items 1-30 of 211 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_373_1
Bradyrhizobium sp. STM 3843, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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550..1275
DNA (726bp) protein (242aa)
Putative Methyltransferase n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TGJ4_9BRAD rbh
Putative Methyltransferase {ECO:0000313|EMBL:CCE05582.1}; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;"
methyltransferase
SCNpilot_cont_500_bf_scaffold_373_2
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1303..3138
DNA (1836bp) protein (612aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HMC2_9BRAD rbh
Bradyrhizobium elkanii strain UASWS1015 Contig187, whole genome shotgun sequence {ECO:0000313|EMBL:KIU43430.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
cyclic nucleotide-binding protein; K07001 NTE family protein rbh
SCNpilot_cont_500_bf_scaffold_373_3
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3278..3484
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI0002EA87B5
Uncharacterized protein {ECO:0000313|EMBL:KJC59702.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_373_4
unknown

Not on your lists

comp(3555..3941)
DNA (387bp) protein (129aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_373_5
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4019..6307)
DNA (2289bp) protein (763aa)
hypothetical protein; K01130 arylsulfatase [EC:3.1.6.1] rbh
Uncharacterized protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJY4_BRAJP rbh
Uncharacterized protein {ECO:0000313|EMBL:BAL11194.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_500_bf_scaffold_373_6
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6478..7179
DNA (702bp) protein (234aa)
Transcriptional regulatory protein n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DJY5_BRAJP
transcriptional regulator
Transcriptional regulatory protein {ECO:0000313|EMBL:BAL11195.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
SCNpilot_cont_500_bf_scaffold_373_7
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7443..8474
DNA (1032bp) protein (344aa)
Methyltransferase FkbM family n=1 Tax=Afipia sp. 1NLS2 RepID=D6VAF1_9BRAD rbh
FkbM family methyltransferase {ECO:0000313|EMBL:ETR75328.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
fkbM; FkbM family methyltransferase
SCNpilot_cont_500_bf_scaffold_373_8
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8483..9766
DNA (1284bp) protein (428aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NFL4_AFIFE rbh
Uncharacterized protein {ECO:0000313|EMBL:ETR77280.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_373_9
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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9880..10722
DNA (843bp) protein (281aa)
Short-chain alcohol dehydrogenase n=1 Tax=Bradyrhizobium sp. YR681 RepID=J3I2R4_9BRAD rbh
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase {ECO:0000313|EMBL:KJC61681.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;"
oxidoreductase rbh
SCNpilot_cont_500_bf_scaffold_373_10
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10807..11316
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2Q957_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EIG56313.1}; Flags: Precursor;; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_373_11
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11464..12744)
DNA (1281bp) protein (427aa)
Adenylyl cyclase class-3/4/guanylyl cyclase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13D28_RHOPS rbh
adenylyl cyclase class-3/4/guanylyl cyclase rbh
Adenylyl cyclase class-3/4/guanylyl cyclase {ECO:0000313|EMBL:ABE38011.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_373_12
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12776..14158)
DNA (1383bp) protein (461aa)
cytochrome P450; K00517 [EC:1.14.-.-] rbh
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8P4B9_9BRAD rbh
Uncharacterized protein {ECO:0000313|EMBL:EKS33248.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
SCNpilot_cont_500_bf_scaffold_373_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14410..15432
DNA (1023bp) protein (341aa)
putative adenylate/guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1]
Putative adenylate/guanylate cyclase n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07T84_RHOP5
Putative adenylate/guanylate cyclase {ECO:0000313|EMBL:ABJ04850.1}; Flags: Precursor;; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;"
SCNpilot_cont_500_bf_scaffold_373_14
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15549..16481
DNA (933bp) protein (311aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
heat shock protein HtpX; K03799 heat shock protein HtpX [EC:3.4.24.-]
Protease HtpX homolog n=1 Tax=Nitrobacter sp. Nb-311A RepID=A3WSM9_9BRAD
SCNpilot_cont_500_bf_scaffold_373_15
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16676..17092
DNA (417bp) protein (139aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CD9_RHOPB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD85947.1}; Flags: Precursor;; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
SCNpilot_cont_500_bf_scaffold_373_16
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17219..17467
DNA (249bp) protein (83aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CD8_RHOPB
Uncharacterized protein {ECO:0000313|EMBL:KIZ45573.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_373_17
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17576..18244)
DNA (669bp) protein (223aa)
Putative enzyme with metallo-hydrolase/oxidoreductase domain, YcbL-like protein n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4ZH40_9BRAD rbh
putative enzyme with metallo-hydrolase/oxidoreductase domain, YcbL-like protein rbh
Putative enzyme with metallo-hydrolase/oxidoreductase domain, YcbL-like protein {ECO:0000313|EMBL:BAM93108.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium oligotrophicum S58.;"
SCNpilot_cont_500_bf_scaffold_373_18
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18371..19492)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QIF6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EGP09047.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiaceae bacterium SG-6C.;"
von Willebrand factor, type A rbh
SCNpilot_cont_500_bf_scaffold_373_19
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19649..20131
DNA (483bp) protein (161aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. WSM471 RepID=H5YKV2_9BRAD
Putative uncharacterized protein {ECO:0000313|EMBL:EHR06529.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_373_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20144..20698)
DNA (555bp) protein (185aa)
Response regulator receiver n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13EW8_RHOPS rbh
response regulator receiver; K15012 two-component system, response regulator RegA rbh
Response regulator receiver {ECO:0000313|EMBL:ABE37371.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
SCNpilot_cont_500_bf_scaffold_373_21
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20802..22127)
DNA (1326bp) protein (442aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
periplasmic sensor signal transduction histidine kinase; K15011 two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
Histidine kinase n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21CF2_RHOPB
SCNpilot_cont_500_bf_scaffold_373_22
Bradyrhizobium sp. WSM1253, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22336..23700
DNA (1365bp) protein (455aa)
Polyhydroxyalkanoate depolymerase, intracellular n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QJQ4_9BRAD
Polyhydroxyalkanoate depolymerase, intracellular {ECO:0000313|EMBL:EIG60010.1}; TaxID=319003 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM1253.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_373_23
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24021..24776
DNA (756bp) protein (252aa)
metal-dependent hydrolase n=1 Tax=Bradyrhizobium japonicum RepID=UPI000363B3E5
hypothetical protein; K07043
Uncharacterized protein {ECO:0000313|EMBL:ABA03399.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
SCNpilot_cont_500_bf_scaffold_373_24
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24804..26993)
DNA (2190bp) protein (730aa)
penicillin-binding protein 1A n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036CF84F rbh
Penicillin-binding protein {ECO:0000313|EMBL:AHY55414.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum SEMIA 5079.;"
pbpC; penicillin-binding protein rbh
SCNpilot_cont_500_bf_scaffold_373_25
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27228..28451)
DNA (1224bp) protein (408aa)
Uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07V11_RHOP5
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ45583.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_373_26
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28597..28959)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P476_9BRAD
Membrane protein {ECO:0000313|EMBL:KJC51620.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein; K08987 putative membrane protein
SCNpilot_cont_500_bf_scaffold_373_27
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29031..29558
DNA (528bp) protein (176aa)
methylated-DNA-[protein]-cysteine S-methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]
Methylated-DNA-[protein]-cysteine S-methyltransferase n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7DKW8_BRAJP
Cysteine methyltransferase {ECO:0000313|EMBL:KGT77513.1}; TaxID=375 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum.;"
SCNpilot_cont_500_bf_scaffold_373_28
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29588..32371)
DNA (2784bp) protein (928aa)
bifunctional uridylyltransferase/uridylyl-removing enzyme; K00990 [protein-PII] uridylyltransferase [EC:2.7.7.59] rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HDP5_9BRAD rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|HAMAP-Rule:MF_00277, ECO:0000256|SAAS:SAAS00228994}; Short=UTase/UR {ECO:0000256|HAMAP-Rule:MF_00277};; Bifunctional [protein-PII] modification enzyme {ECO:0000256|HAMAP-Rule:MF_00277}; Bifunctional nitrogen sensor protein {ECO:0000256|HAMAP-Rule:MF_00277}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
SCNpilot_cont_500_bf_scaffold_373_29
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32636..33688
DNA (1053bp) protein (351aa)
Aliphatic sulfonates family ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GZL1_9BRAD
Bradyrhizobium elkanii strain UASWS1015 Contig172, whole genome shotgun sequence {ECO:0000313|EMBL:KIU49849.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
ABC transporter substrate-binding protein; K15553 sulfonate transport system substrate-binding protein
SCNpilot_cont_500_bf_scaffold_373_30
Bradyrhizobium sp. STM 3809, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33685..34527
DNA (843bp) protein (281aa)
Putative sulfonate ABC transporter, permease protein (SsuC/ycbM-like) n=1 Tax=Bradyrhizobium sp. STM 3809 RepID=H0TB01_9BRAD
Putative sulfonate ABC transporter, permease protein (SsuC/ycbM-like) {ECO:0000313|EMBL:CCE03628.1}; TaxID=551936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3809.;"
ABC transporter inner membrane protein; K15554 sulfonate transport system permease protein
Displaying items 1-30 of 211 in total

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