name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
SCNpilot_cont_500_bf_scaffold_1355_1
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3..2528
|
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210}; TaxID=754504 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens SEMIA 5080.;"
carB; carbamoyl phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]
Carbamoyl-phosphate synthase large chain n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89DR2_BRADU
|
|
SCNpilot_cont_500_bf_scaffold_1355_2
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
2727..3203
|
Transcription elongation factor GreA n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H0I7_9BRAD
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
greA; transcription elongation factor GreA; K03624 transcription elongation factor GreA
|
|
SCNpilot_cont_500_bf_scaffold_1355_3
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
3413..3799
|
Oxidoreductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HFL0_9BRAD
LuxR family transcriptional regulator {ECO:0000313|EMBL:KJC44949.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
hypothetical protein; K15977 putative oxidoreductase
|
|
SCNpilot_cont_500_bf_scaffold_1355_4
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(3876..4403)
|
Transcriptional regulator, AsnC family n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IZY7_RHOP2
AsnC family transcriptional regulator
Transcriptional regulator, AsnC family {ECO:0000313|EMBL:ABD06223.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
|
|
SCNpilot_cont_500_bf_scaffold_1355_5
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
4616..5581
|
Thioredoxin reductase {ECO:0000256|RuleBase:RU003881}; EC=1.8.1.9 {ECO:0000256|RuleBase:RU003881};; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
Thioredoxin reductase n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0RT66_9BRAD
|
|
SCNpilot_cont_500_bf_scaffold_1355_6
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
5584..6507
|
Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07JJ3_RHOP5
rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KIZ39621.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
LysR family transcriptional regulator
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1355_7
unknown
|
Not on your lists |
comp(6423..6617)
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1355_8
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(6914..7594)
|
Cobyrinic acid a,c-diamide synthase n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13B51_RHOPS
rbh
cobyrinic acid a,c-diamide synthase
rbh
Cobyrinic acid a,c-diamide synthase {ECO:0000313|EMBL:ABE38688.1}; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
|
|
SCNpilot_cont_500_bf_scaffold_1355_9
Nitrobacter winogradskyi, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(7765..8073)
|
Putative uncharacterized protein n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SPT2_NITWN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABA05709.1}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;"
|
|
SCNpilot_cont_500_bf_scaffold_1355_10
Bradyrhizobium diazoefficiens, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
8317..8670
|
Blr4850 protein n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89KQ4_BRADU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAR62702.1}; TaxID=1355477 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium diazoefficiens.;"
|
|
SCNpilot_cont_500_bf_scaffold_1355_11
unknown
|
Not on your lists |
8718..8882
|
This feature has no annotations |
|
SCNpilot_cont_500_bf_scaffold_1355_trna_1
unknown
|
Not on your lists |
comp(8908..8987)
|
transferRNA
|
|
SCNpilot_cont_500_bf_scaffold_1355_12
Bradyrhizobium sp. BTAi1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9089..9523)
|
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=A5ERB2_BRASB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ38706.1}; TaxID=288000 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182).;"
|
|
SCNpilot_cont_500_bf_scaffold_1355_13
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(9859..10242)
|
phasin n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034DA711
phasin 2
Phasin 2 {ECO:0000313|EMBL:ABD89467.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;"
|
|
SCNpilot_cont_500_bf_scaffold_1355_14
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
10572..13802
|
Two-component hybrid sensor and regulator n=1 Tax=Bradyrhizobium japonicum USDA 6 RepID=G7D4V2_BRAJP
rbh
Histidine kinase {ECO:0000313|EMBL:KIZ39652.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
two-component hybrid sensor and regulator
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1355_15
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
13917..14942
|
Uncharacterized protein n=1 Tax=Afipia broomeae ATCC 49717 RepID=K8P349_9BRAD
rbh
Extracellular solute-binding protein {ECO:0000313|EMBL:EJZ33768.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
extracellular solute-binding protein; K02012 iron(III) transport system substrate-binding protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1355_16
Afipia clevelandensis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
15040..16686
|
Uncharacterized protein n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NXZ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS35192.1}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;"
binding-protein-dependent transport systems inner membrane component; K02011 iron(III) transport system permease protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1355_17
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(16754..17041)
|
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IIC4_9BRAD
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B {ECO:0000313|EMBL:ERF82259.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
3-ketoacid-coenzyme A transferase subunit B
|
|
SCNpilot_cont_500_bf_scaffold_1355_18
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(17415..18119)
|
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5); K01028 3-oxoacid CoA-transferase subunit A [EC:2.8.3.5]
rbh
3-oxoacid CoA-transferase, subunit A {ECO:0000313|EMBL:ABE38671.1}; EC=2.8.3.5 {ECO:0000313|EMBL:ABE38671.1};; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;"
3-oxoacid CoA-transferase, subunit A n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q13B68_RHOPS
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1355_19
Bradyrhizobium sp. LTSP885, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
18405..20318
|
cell envelope biogenesis protein AsmA n=1 Tax=Bradyrhizobium elkanii RepID=UPI000361AEB5
rbh
Cell envelope biogenesis protein AsmA {ECO:0000313|EMBL:KJC43769.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;"
AsmA; K07289 AsmA protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1355_20
Bradyrhizobium sp. YR681, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(20337..21155)
|
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Bradyrhizobium sp. YR681 RepID=J2W7K8_9BRAD
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJN14762.1}; Flags: Precursor;; TaxID=1144344 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. YR681.;"
ABC transporter permease; K11074 putrescine transport system permease protein
|
|
SCNpilot_cont_500_bf_scaffold_1355_21
Bradyrhizobium sp. LTSP849, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(21152..22063)
|
putrescine/spermidine ABC transporter permease n=1 Tax=Bradyrhizobium japonicum RepID=UPI000378F0D3
rbh
ABC transporter permease; K11075 putrescine transport system permease protein
rbh
Spermidine/putrescine ABC transporter permease {ECO:0000313|EMBL:KJC38518.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;"
|
|
SCNpilot_cont_500_bf_scaffold_1355_22
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(22065..23216)
|
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;"
ABC transporter ATP-binding protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034B7465
rbh
spermidine/putrescine ABC transporter ATP-binding subunit; K11076 putrescine transport system ATP-binding protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1355_23
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(23375..26068)
|
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1GXP4_9BRAD
rbh
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ERF82272.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
hypothetical protein
rbh
|
|
SCNpilot_cont_500_bf_scaffold_1355_24
Bradyrhizobium sp. DFCI-1, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
26312..27415
|
Peptide-methionine (R)-S-oxide reductase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HBX3_9BRAD
Peptide-methionine (R)-S-oxide reductase {ECO:0000313|EMBL:ERF82273.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;"
NAD binding site:FAD dependent oxidoreductase
|
|
SCNpilot_cont_500_bf_scaffold_1355_25
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(27522..27707)
|
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NUL2_AFIFE
Uncharacterized protein {ECO:0000313|EMBL:EKS31135.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis ATCC 53690.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1355_26
Nitrobacter sp. Nb-311A, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
27936..28142
|
hypothetical protein n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI00034C654D
Uncharacterized protein {ECO:0000313|EMBL:EAQ34982.1}; TaxID=314253 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter sp. Nb-311A.;"
hypothetical protein
|
|
SCNpilot_cont_500_bf_scaffold_1355_27
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
comp(28368..29039)
|
Diguanylate cyclase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J052_RHOP2
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:ABD06158.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;"
|
|
SCNpilot_cont_500_bf_scaffold_1355_28
Bradyrhizobium sp. LTSPM299, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29167..29655
|
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; EC=5.4.99.18 {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};; 5-(carboxyamino)imidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. L
phosphoribosylaminoimidazole carboxylase catalytic subunit; K01588 5-(carboxyamino)imidazole ribonucleotide mutase [EC:5.4.99.18]
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Bradyrhizobium elkanii RepID=UPI000315C978
|
|
SCNpilot_cont_500_bf_scaffold_1355_29
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria
|
Not on your lists |
29652..30761
|
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; EC=6.3.4.18 {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200};; 5-(carboxyamino)imidazole ribonucleotide synthetase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizo
purK; phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21); K01589 5-(carboxyamino)imidazole ribonucleotide synthase [EC:6.3.4.18]
rbh
Phosphoribosylaminoimidazole carboxylase, ATPase subunit n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IF38_9BRAD
rbh
|