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SCNpilot_cont_500_bf_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 506 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_35_1
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3..119)
DNA (117bp) protein (39aa)
transcription antitermination factor NusG n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BB60F
nusG; transcription antiterminator; K02601 transcriptional antiterminator NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_2
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(181..456)
DNA (276bp) protein (92aa)
preprotein translocase subunit SecE n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D1497
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
preprotein translocase subunit SecE; K03073 preprotein translocase subunit SecE
SCNpilot_cont_500_bf_scaffold_35_trna_7
unknown

Not on your lists

comp(500..572)
DNA (73bp)
transferRNA
SCNpilot_cont_500_bf_scaffold_35_3
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(745..2106)
DNA (1362bp) protein (454aa)
NAD-dependent aldehyde dehydrogenase; K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
succinate-semialdehyde dehdyrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034B6CB3 rbh
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:BAJ75425.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_4
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2148..3611)
DNA (1464bp) protein (488aa)
Large neutral amino acids transporter small subunit 2 n=1 Tax=Microbacterium sp. B19 RepID=UPI00034AF2C9 rbh
amino acid transporters rbh
Amino acid transporters {ECO:0000313|EMBL:BAJ75424.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_5
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3608..4507)
DNA (900bp) protein (300aa)
universal stress protein UspA n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B403D0 rbh
universal stress protein UspA rbh
Universal stress protein UspA {ECO:0000313|EMBL:BAJ75423.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_6
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4504..5964)
DNA (1461bp) protein (487aa)
monoamine oxidase; K03343 putrescine oxidase [EC:1.4.3.10] rbh
Monoamine oxidase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6Q8_MICTS rbh
Monoamine oxidase {ECO:0000313|EMBL:BAJ75422.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_7
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6055..7449)
DNA (1395bp) protein (465aa)
gabT; 4-aminobutyrate aminotransferase; K07250 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase [EC:2.6.1.19 2.6.1.22] rbh
4-aminobutyrate aminotransferase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034812F0 rbh
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:BAJ75421.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_8
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7458..9029
DNA (1572bp) protein (524aa)
polyketide synthase regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034649FF rbh
Polyketide synthase regulator {ECO:0000313|EMBL:KHK98952.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
regulator of polyketide synthase expression; K09684 purine catabolism regulatory protein rbh
SCNpilot_cont_500_bf_scaffold_35_9
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9175..10308)
DNA (1134bp) protein (378aa)
LacI family transcription regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034CAB22 rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAJ75412.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_10
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10305..12185)
DNA (1881bp) protein (627aa)
beta-glucosidase-related glycosidase; K05349 beta-glucosidase [EC:3.2.1.21] rbh
beta-glucosidase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BDD4A rbh
Beta-glucosidase-related glycosidase {ECO:0000313|EMBL:BAJ75411.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_11
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12211..12951)
DNA (741bp) protein (247aa)
sugar ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI00034810B8 rbh
sugar ABC transporter permease; K10190 lactose/L-arabinose transport system permease protein rbh
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:BAJ75410.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_12
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13069..14016)
DNA (948bp) protein (316aa)
ABC transporter permease n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B40D0F rbh
sugar ABC transporter permease; K10189 lactose/L-arabinose transport system permease protein rbh
ABC-type sugar transport systems, permease components {ECO:0000313|EMBL:BAJ75409.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_13
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14021..15283)
DNA (1263bp) protein (421aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6P4_MICTS rbh
sugar ABC transporter periplasmic protein; K10188 lactose/L-arabinose transport system substrate-binding protein rbh
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:BAJ75408.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_14
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15721..16539
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XQQ3_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL44391.1}; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
superfamily I DNA and RNA helicase and helicase subunits
SCNpilot_cont_500_bf_scaffold_35_15
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16858..17463)
DNA (606bp) protein (202aa)
Transcriptional regulator n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8N6P3_MICTS rbh
transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:BAJ75407.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_16
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17530..19122)
DNA (1593bp) protein (531aa)
cellobiose phosphorylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034939FC rbh
cellobiose phosphorylase rbh
Cellobiose phosphorylase {ECO:0000313|EMBL:BAJ75406.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_17
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19346..20821)
DNA (1476bp) protein (492aa)
XRE family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B458BD rbh
XRE family transcriptional regulator {ECO:0000313|EMBL:KEP75736.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_35_18
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20949..22265
DNA (1317bp) protein (439aa)
isocitrate lyase; K01637 isocitrate lyase [EC:4.1.3.1] rbh
isocitrate lyase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A88F9 rbh
Isocitrate lyase {ECO:0000313|EMBL:BAJ75398.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_19
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22330..24021
DNA (1692bp) protein (564aa)
aceB; malate synthase; K01638 malate synthase [EC:2.3.3.9] rbh
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
malate synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345FE6C rbh
SCNpilot_cont_500_bf_scaffold_35_20
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24079..25344)
DNA (1266bp) protein (422aa)
Chloride channel protein EriC n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGT6_MICTS rbh
Chloride channel protein {ECO:0000313|EMBL:KEP75734.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
chloride channel protein EriC rbh
SCNpilot_cont_500_bf_scaffold_35_21
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25430..25753
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003457791
hypothetical protein
Uncharacterized conserved protein {ECO:0000313|EMBL:BAJ75384.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_22
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25817..27016
DNA (1200bp) protein (400aa)
Aspartate/tyrosine/aromatic aminotransferase n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NGT4_MICTS rbh
aspC; aspartate/tyrosine/aromatic aminotransferase rbh
Aspartate/tyrosine/aromatic aminotransferase {ECO:0000313|EMBL:BAJ75383.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_23
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27243..28379)
DNA (1137bp) protein (379aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
UDP-N-acetylmuramate dehydrogenase; K00075 UDP-N-acetylmuramate dehydrogenase [EC:1.1.1.158] rbh
UDP-N-acetylmuramate dehydrogenase n=1 Tax=Microbacterium sp. B19 RepID=UPI000345717C rbh
SCNpilot_cont_500_bf_scaffold_35_24
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28379..28783)
DNA (405bp) protein (135aa)
acyl dehydratase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A1D8B
acyl dehydratase
Acyl dehydratase {ECO:0000313|EMBL:BAJ75381.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_25
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28780..29223)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B38EB8
hypothetical protein
UPF0336 protein MTES_2416 {ECO:0000256|HAMAP-Rule:MF_00799}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_26
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29262..30059)
DNA (798bp) protein (266aa)
permease n=1 Tax=Microbacterium sp. B19 RepID=UPI0003452205 rbh
permease; K07090 rbh
Predicted permease {ECO:0000313|EMBL:BAJ75379.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_27
Microbacterium sp. SUBG005, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

30375..31043
DNA (669bp) protein (223aa)
NADP oxidoreductase n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B78590 rbh
NADP oxidoreductase {ECO:0000313|EMBL:KEP75728.1}; TaxID=1504156 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. SUBG005.;"
dinucleotide-binding enzyme; K06988 rbh
SCNpilot_cont_500_bf_scaffold_35_28
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31212..32372)
DNA (1161bp) protein (387aa)
metB; cystathionine beta-lyase/cystathionine gamma-synthase; K01739 cystathionine gamma-synthase [EC:2.5.1.48] rbh
cystathionine gamma-synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034BB6FD rbh
Cystathionine beta-lyase/cystathionine gamma-synthase {ECO:0000313|EMBL:BAJ75377.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
SCNpilot_cont_500_bf_scaffold_35_29
Microbacterium testaceum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32369..33457)
DNA (1089bp) protein (363aa)
cysteine synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] rbh
cystathionine beta-synthase n=1 Tax=Microbacterium sp. B19 RepID=UPI000348A8D4 rbh
Cysteine synthase {ECO:0000313|EMBL:BAJ75376.1}; TaxID=979556 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium testaceum (strain StLB037).;"
Displaying items 1-30 of 506 in total

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