ggKbase home page

SCNpilot_cont_500_bf_scaffold_41

Search features with annotation key words

Displaying items 31-60 of 764 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_41_31
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35462..35950)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGD4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFF28760.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_41_32
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36039..37319)
DNA (1281bp) protein (427aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] rbh
S-adenosylmethionine synthase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW0_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_41_33
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(37495..38445)
DNA (951bp) protein (317aa)
Hydrogen peroxide-inducible genes activator n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZV9_FLAB3 rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KEY18245.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Hydrogen peroxide-inducible genes activator; K04761 LysR family transcriptional regulator, hydrogen peroxide-inducible genes activator rbh
SCNpilot_cont_500_bf_scaffold_41_34
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

38535..40028
DNA (1494bp) protein (498aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
catalase; K03781 catalase [EC:1.11.1.6] rbh
Catalase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWY7_9FLAO rbh
SCNpilot_cont_500_bf_scaffold_41_35
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40122..40889
DNA (768bp) protein (256aa)
enoyl-CoA hydratase (EC:4.2.1.17); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] rbh
Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWY8_9FLAO rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KFF09521.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
SCNpilot_cont_500_bf_scaffold_41_36
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

40974..41399
DNA (426bp) protein (142aa)
deoxycytidylate deaminase; K01493 dCMP deaminase [EC:3.5.4.12]
Deoxycytidylate deaminase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZV6_FLAB3
Deoxycytidylate deaminase {ECO:0000313|EMBL:ACU06641.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_41_37
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

41416..42321
DNA (906bp) protein (302aa)
Tyrosine recombinase XerC n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZV5_FLAB3 rbh
Integrase; K04763 integrase/recombinase XerD rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_41_38
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42323..42829
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZV4_FLAB3
NUDIX hydrolase {ECO:0000313|EMBL:KEY18240.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_41_39
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

42881..43579
DNA (699bp) protein (233aa)
Ribosomal large subunit pseudouridine synthase D; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] rbh
Pseudouridine synthase, RluA family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX18_9FLAO rbh
Pseudouridine synthase {ECO:0000313|EMBL:KIC62386.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
SCNpilot_cont_500_bf_scaffold_41_40
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(43612..45753)
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CQ40_ELIME rbh
TonB-dependent receptor {ECO:0000313|EMBL:KFC24677.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_41
Elizabethkingia meningoseptica, Elizabethkingia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(45807..47996)
DNA (2190bp) protein (730aa)
TonB-dependent receptor n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CQ60_ELIME rbh
TonB-dependent receptor {ECO:0000313|EMBL:EOR31447.1}; TaxID=1216967 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535.;"
TonB-dependent receptor rbh
SCNpilot_cont_500_bf_scaffold_41_42
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

48090..49109
DNA (1020bp) protein (340aa)
Histidine kinase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX04_9FLAO rbh
Histidine kinase {ECO:0000313|EMBL:KIC62374.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
signal transduction histidine kinase LytS
SCNpilot_cont_500_bf_scaffold_41_43
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49106..49789
DNA (684bp) protein (228aa)
Two component transcriptional regulator, LytTR family protein n=2 Tax=Elizabethkingia anophelis RepID=H0KRD7_9FLAO rbh
Chemotaxis protein CheY {ECO:0000313|EMBL:KFE99322.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
LytTR family two component transcriptional regulator
SCNpilot_cont_500_bf_scaffold_41_44
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

50439..51746
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PD15_CHIPD rbh
Uncharacterized protein {ECO:0000313|EMBL:KGO78961.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium beibuense F44-8.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_45
Snodgrassella alvi, Snodgrassella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

51802..52548
DNA (747bp) protein (249aa)
cah; carbonic anhydrase (EC:4.2.1.1); K01674 carbonic anhydrase [EC:4.2.1.1]
Uncharacterized protein n=2 Tax=Apis mellifera RepID=H9KAK5_APIME
Carbonic anhydrase {ECO:0000313|EMBL:KES09725.1}; TaxID=1445515 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella.;" source="Snodgrassella alvi SCGC AB-598-O11.;"
SCNpilot_cont_500_bf_scaffold_41_46
Flavobacterium aquatile, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(52652..53998)
DNA (1347bp) protein (449aa)
glutamate dehydrogenase (EC:1.4.1.4); K00262 glutamate dehydrogenase (NADP+) [EC:1.4.1.4]
Glutamate dehydrogenase n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8XBK7_FLACA
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1453498 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium aquatile LMG 4008.;"
SCNpilot_cont_500_bf_scaffold_41_47
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(54166..56439)
DNA (2274bp) protein (758aa)
Aconitate hydratase {ECO:0000313|EMBL:EFK37204.1}; EC=4.2.1.3 {ECO:0000313|EMBL:EFK37204.1};; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
aconitate hydratase (EC:4.2.1.3); K01681 aconitate hydratase 1 [EC:4.2.1.3] rbh
Aconitate hydratase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VX02_9FLAO rbh
SCNpilot_cont_500_bf_scaffold_41_48
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

56986..57738
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZV0_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA89368.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_49
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

57959..60088
DNA (2130bp) protein (710aa)
TonB-dependent outer membrane receptor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZU9_FLAB3 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KIA89367.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
TonB-dependent outer membrane receptor; K02014 iron complex outermembrane recepter protein rbh
SCNpilot_cont_500_bf_scaffold_41_50
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

60186..60869
DNA (684bp) protein (228aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZU8_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06633.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_41_51
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

60957..61706
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZU7_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY18232.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_41_52
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

61673..62188
DNA (516bp) protein (172aa)
Acyl-CoA hydrolase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGV7_9FLAO rbh
Thioesterase {ECO:0000313|EMBL:KFF09513.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
acyl-CoA thioester hydrolase rbh
SCNpilot_cont_500_bf_scaffold_41_53
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

62215..63165
DNA (951bp) protein (317aa)
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95); K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] rbh
4-phosphoerythronate dehydrogenase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWZ5_9FLAO rbh
2-hydroxyacid dehydrogenase {ECO:0000313|EMBL:KIA89365.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_cont_500_bf_scaffold_41_54
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

63311..66238
DNA (2928bp) protein (976aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZU3_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA89363.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_55
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

66254..66712
DNA (459bp) protein (153aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZU2_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY18228.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_41_56
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(66792..67121)
DNA (330bp) protein (110aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZU1_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06626.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_41_57
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(67121..67936)
DNA (816bp) protein (272aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] rbh
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZU0_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_41_58
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(68091..68804)
DNA (714bp) protein (238aa)
Transcriptional regulator, Crp/Fnr family n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZT9_FLAB3 rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:KEY18225.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Crp/Fnr family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_41_59
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

68896..71286
DNA (2391bp) protein (797aa)
Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] rbh
Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZT8_FLAB3 rbh
ATPase {ECO:0000313|EMBL:KIA89358.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_cont_500_bf_scaffold_41_60
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

71400..71606
DNA (207bp) protein (69aa)
Cytochrome oxidase maturation protein, cbb3-type n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CGF4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KEY18223.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
cbb3-type cytochrome oxidase maturation protein
Displaying items 31-60 of 764 in total

View Taxonomy