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SCNpilot_cont_500_bf_scaffold_41

Search features with annotation key words

Displaying items 1-30 of 764 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_41_1
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(48..1988)
DNA (1941bp) protein (647aa)
LysM-repeat protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T0_FLAB3 rbh
Amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIA90231.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
LysM-repeat protein rbh
SCNpilot_cont_500_bf_scaffold_41_2
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2026..3636)
DNA (1611bp) protein (537aa)
Putative cysteine ligase BshC {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275526}; EC=6.-.-.- {ECO:0000256|HAMAP-Rule:MF_01867, ECO:0000256|SAAS:SAAS00275528};; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
UPF0747 protein FIC_02311 n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T1_FLAB3 rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_3
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3665..5647)
DNA (1983bp) protein (661aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T2_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU08745.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_4
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5688..7181)
DNA (1494bp) protein (498aa)
Putative outer membrane protein, probably involved in nutrient binding n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T3_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KEY17766.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_5
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7202..10138)
DNA (2937bp) protein (979aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T4_FLAB3 rbh
hypothetical protein rbh
Putative outer membrane protein probably involved in nutrient binding {ECO:0000313|EMBL:ACU08747.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_41_6
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10358..13114)
DNA (2757bp) protein (919aa)
Translation initiation factor IF-2 n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2T9_FLAB3 rbh
Translation initiation factor IF-2 {ECO:0000256|HAMAP-Rule:MF_00100, ECO:0000256|RuleBase:RU000644}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
infB; translation initiation factor IF-2; K02519 translation initiation factor IF-2 rbh
SCNpilot_cont_500_bf_scaffold_41_7
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13186..14433)
DNA (1248bp) protein (416aa)
Transcription termination protein NusA n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2U0_FLAB3 rbh
nusA; transcription elongation factor NusA; K02600 N utilization substance protein A rbh
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_41_8
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14490..14984)
DNA (495bp) protein (165aa)
Ribosome maturation factor RimP n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVU9_9FLAO
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium taiwanense.;"
hypothetical protein; K09748 ribosome maturation factor RimP
SCNpilot_cont_500_bf_scaffold_41_9
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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15270..16583
DNA (1314bp) protein (438aa)
Nucleotide sugar dehydrogenase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVU8_9FLAO rbh
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KFF08280.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
nucleotide sugar dehydrogenase rbh
SCNpilot_cont_500_bf_scaffold_41_10
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16652..17614
DNA (963bp) protein (321aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2U3_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA89924.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_11
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17690..18532
DNA (843bp) protein (281aa)
ABC-2 type transporter n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVU4_9FLAO rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
ABC transporter permease protein
SCNpilot_cont_500_bf_scaffold_41_12
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18535..19734
DNA (1200bp) protein (400aa)
ABC transporter, ATP-binding protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVU3_9FLAO rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFK37868.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
polysialic rbh
SCNpilot_cont_500_bf_scaffold_41_13
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

19748..20578
DNA (831bp) protein (277aa)
Methyltransferase FkbM family n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X2U6_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:AHJ96398.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
methyltransferase FkbM family
SCNpilot_cont_500_bf_scaffold_41_14
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20565..21710
DNA (1146bp) protein (382aa)
Lipopolysaccharide biosynthesis protein-like protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NSW8_9SPHI rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:KFF13966.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_41_15
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

21726..22610
DNA (885bp) protein (295aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas gadei ATCC BAA-286 RepID=F5ISI1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KIA82866.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
family 2 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_41_16
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

22610..23470
DNA (861bp) protein (287aa)
glycosyl transferase family protein (EC:2.4.1.-); K00754 [EC:2.4.1.-]
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000361FE32
Beta-1,3-N-acetylglucosaminyltransferase {ECO:0000313|EMBL:BAP29227.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
SCNpilot_cont_500_bf_scaffold_41_17
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23475..24371
DNA (897bp) protein (299aa)
glycosyl transferase family protein (EC:2.4.1.-)
Glycosyl transferase, family 2 n=1 Tax=Flavobacterium frigoris PS1 RepID=H7FM88_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:GAE63806.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
SCNpilot_cont_500_bf_scaffold_41_18
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24368..25228
DNA (861bp) protein (287aa)
hypothetical protein n=1 Tax=Flavobacterium sp. ACAM 123 RepID=UPI000361FE32
Beta-1,3-N-acetylglucosaminyltransferase {ECO:0000313|EMBL:BAP29227.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
glycosyl transferase family protein
SCNpilot_cont_500_bf_scaffold_41_19
Synechococcus sp. WH 7805, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

25241..26023
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain WH7805) RepID=A4CXB2_SYNPV
Uncharacterized protein {ECO:0000313|EMBL:EAR17912.1}; TaxID=59931 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain WH7805).;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_41_20
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26023..26928
DNA (906bp) protein (302aa)
Glycosyl transferase, group 2 family protein n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6H032_FLAPJ
Uncharacterized protein {ECO:0000313|EMBL:KEY17778.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
glycosyl transferase family protein
SCNpilot_cont_500_bf_scaffold_41_21
Chryseobacterium indologenes, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

26915..27871
DNA (957bp) protein (319aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVT2_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:GAE63803.1}; TaxID=1218103 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium indologenes NBRC 14944.;"
family 2 glycosyl transferase
SCNpilot_cont_500_bf_scaffold_41_22
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27881..28669
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Marinobacterium stanieri RepID=UPI000255963C
Uncharacterized protein {ECO:0000313|EMBL:KFF22114.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
SCNpilot_cont_500_bf_scaffold_41_23
Chryseobacterium oranimense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28666..29631
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Flavobacteria bacterium BAL38 RepID=A3J1G5_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:CEJ68306.1}; TaxID=1300143 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium oranimense G311.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_41_24
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29767..30714
DNA (948bp) protein (316aa)
Glycosyltransferase, group 2 family protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VVS9_9FLAO rbh
Capsular biosynthesis protein CpsI {ECO:0000313|EMBL:KIA90235.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
glycosyl transferase family protein
SCNpilot_cont_500_bf_scaffold_41_25
unknown

Not on your lists

30711..30905
DNA (195bp) protein (65aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_41_26
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30939..32741
DNA (1803bp) protein (601aa)
asnB5; asparagine synthase (EC:6.3.5.4); K01953 asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4] rbh
Asparagine synthetase n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K306_9FLAO rbh
Asparagine synthase {ECO:0000313|EMBL:KEY17780.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_cont_500_bf_scaffold_41_27
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32804..33772
DNA (969bp) protein (323aa)
Tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] rbh
Tryptophanyl-tRNA synthetase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW5_FLAB3 rbh
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KEY18250.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_cont_500_bf_scaffold_41_28
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(33788..34483)
DNA (696bp) protein (232aa)
2-haloalkanoic acid dehalogenase (EC:3.8.1.2); K07025 putative hydrolase of the HAD superfamily rbh
2-haloalkanoic acid dehalogenase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW4_FLAB3 rbh
HAD family hydrolase {ECO:0000313|EMBL:KEY18249.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_cont_500_bf_scaffold_41_29
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34510..34644)
DNA (135bp) protein (45aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW3_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06648.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_41_30
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34694..35284)
DNA (591bp) protein (197aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6WZW2_FLAB3 rbh
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:KEY18248.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
RNA polymerase sigma-70 factor, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily rbh
Displaying items 1-30 of 764 in total

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