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SCNpilot_cont_500_bf_scaffold_398

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_398_1
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(353..1840)
DNA (1488bp) protein (496aa)
Histidine ammonia-lyase {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026}; EC=4.3.1.3 {ECO:0000256|RuleBase:RU004479, ECO:0000256|SAAS:SAAS00083026};; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Histidine ammonia-lyase (EC:4.3.1.3); K01745 histidine ammonia-lyase [EC:4.3.1.3] rbh
Histidine ammonia-lyase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VWR3_9FLAO rbh
SCNpilot_cont_500_bf_scaffold_398_2
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

2035..3831
DNA (1797bp) protein (599aa)
UvrABC system protein C n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0K5_FLAB3 rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C rbh
SCNpilot_cont_500_bf_scaffold_398_3
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3832..4590)
DNA (759bp) protein (253aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0K6_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA88247.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_398_4
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4613..5860)
DNA (1248bp) protein (416aa)
Fumarylacetoacetase (EC:3.7.1.2); K01555 fumarylacetoacetase [EC:3.7.1.2] rbh
Fumarylacetoacetase n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7VXL4_9FLAO rbh
Fumarylacetoacetase {ECO:0000313|EMBL:KIA89150.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
SCNpilot_cont_500_bf_scaffold_398_5
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5960..6421)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0L9_FLAB3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU06905.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_398_6
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6460..7662)
DNA (1203bp) protein (401aa)
4-hydroxyphenylpyruvate dioxygenase (EC:1.13.11.27); K00457 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27] rbh
4-hydroxyphenylpyruvate dioxygenase n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0Q0Y1_ELIME rbh
4-hydroxyphenylpyruvate dioxygenase {ECO:0000313|EMBL:KFC18875.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
SCNpilot_cont_500_bf_scaffold_398_7
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7721..9001)
DNA (1281bp) protein (427aa)
Acetyl-CoA hydrolase/transferase n=4 Tax=Riemerella anatipestifer RepID=E4TD43_RIEAD rbh
4-hydroxybutyrate CoA-transferase {ECO:0000313|EMBL:KFC18873.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
Acetyl-CoA hydrolase rbh
SCNpilot_cont_500_bf_scaffold_398_8
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9166..10353)
DNA (1188bp) protein (396aa)
Homogentisate 1,2-dioxygenase (EC:1.13.11.5); K00451 homogentisate 1,2-dioxygenase [EC:1.13.11.5] rbh
Homogentisate 1,2-dioxygenase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0M5_FLAB3 rbh
Homogentisate 1,2-dioxygenase {ECO:0000313|EMBL:KIA83016.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
SCNpilot_cont_500_bf_scaffold_398_9
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10492..11049)
DNA (558bp) protein (186aa)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0P4_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KIA88992.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
UDP-N-acetylmuramate--L-alanine ligase
SCNpilot_cont_500_bf_scaffold_398_10
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11049..11498)
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0P3_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:KEY18917.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_398_11
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11509..12318)
DNA (810bp) protein (270aa)
hypothetical protein; K00655 1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51] rbh
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0P2_FLAB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU06928.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_398_12
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12345..12974)
DNA (630bp) protein (210aa)
Hypothetical nudix hydrolase YeaB n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0P1_FLAB3 rbh
NUDIX hydrolase {ECO:0000313|EMBL:KIA88989.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Hypothetical nudix hydrolase YeaB rbh
SCNpilot_cont_500_bf_scaffold_398_13
Riemerella anatipestifer, Riemerella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13059..13772)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Riemerella anatipestifer RA-CH-1 RepID=J9R467_RIEAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFR35203.1}; TaxID=1228997 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Riemerella.;" source="Riemerella anatipestifer RA-CH-1.;"
SCNpilot_cont_500_bf_scaffold_398_14
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13923..15479)
DNA (1557bp) protein (519aa)
cytoplasmic axial filament protein CafA and Ribonuclease G (EC:3.1.4.-); K08301 ribonuclease G [EC:3.1.26.-] rbh
Cytoplasmic axial filament protein CafA and Ribonuclease G n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0P0_FLAB3 rbh
Ribonuclease G {ECO:0000313|EMBL:KEY19096.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
SCNpilot_cont_500_bf_scaffold_398_15
Chryseobacterium solincola, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15917..16207)
DNA (291bp) protein (97aa)
DNA-binding protein HU n=2 Tax=Chryseobacterium RepID=D7VXH5_9FLAO
DNA-binding protein {ECO:0000313|EMBL:KIA82553.1}; TaxID=510955 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium solincola.;"
DNA-binding protein HU; K03530 DNA-binding protein HU-beta
SCNpilot_cont_500_bf_scaffold_398_16
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16255..17283
DNA (1029bp) protein (343aa)
A/G-specific adenine glycosylase (EC:3.2.2.-); K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] rbh
A/G-specific adenine glycosylase {ECO:0000313|EMBL:ACU06924.1}; EC=3.2.2.- {ECO:0000313|EMBL:ACU06924.1};; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
A/G-specific adenine glycosylase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X0N8_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_398_17
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17518..18921
DNA (1404bp) protein (468aa)
succinate-semialdehyde dehydrogenase (nad(p)(+)) (EC:1.2.1.16); K00135 succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16] rbh
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) {ECO:0000313|EMBL:ADV50220.1}; EC=1.2.1.16 {ECO:0000313|EMBL:ADV50220.1};; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630).;"
Succinate-semialdehyde dehydrogenase (NAD(P)(+)) n=1 Tax=Cellulophaga algicola (strain DSM 14237 / IC166 / ACAM 630) RepID=E6XED0_CELAD rbh
SCNpilot_cont_500_bf_scaffold_398_18
unknown

Not on your lists

19076..19195
DNA (120bp) protein (40aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_398_19
unknown

Not on your lists

comp(19580..19678)
DNA (99bp) protein (33aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_398_20
Flavobacterium cauense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19671..21017)
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Flavobacterium enshiense DK69 RepID=V6S9Q3_9FLAO rbh
Uncharacterized protein {ECO:0000313|EMBL:ESU19597.1}; TaxID=1341154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium cauense R2A-7.;"
Cbb3-type cytochrome oxidase subunit 1 rbh
SCNpilot_cont_500_bf_scaffold_398_21
Flavobacterium saliperosum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21022..21432)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Flavobacterium saliperosum S13 RepID=V6SNB9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:ESU27722.1}; TaxID=1341155 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium saliperosum S13.;"
cytochrome C
SCNpilot_cont_500_bf_scaffold_398_22
unknown

Not on your lists

21556..21903
DNA (348bp) protein (116aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_398_23
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21760..23991)
DNA (2232bp) protein (744aa)
Possible TonB-dependent receptor n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5G2_FLAB3 rbh
TonB-dependent receptor rbh
Possible TonB-dependent receptor {ECO:0000313|EMBL:ACU07650.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_398_24
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(24270..25046)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. IITKGP-BTPF85 RepID=T0NV65_9SPHI rbh
Siderophore-interacting protein rbh
Siderophore-interacting protein {ECO:0000313|EMBL:ADZ77847.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
SCNpilot_cont_500_bf_scaffold_398_25
RBG_13_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25059..25790)
DNA (732bp) protein (244aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THL7_NIAKG
short-chain dehydrogenase/reductase SDR
Tax=RBG_13_Deltaproteobacteria_52_11_curated
SCNpilot_cont_500_bf_scaffold_398_26
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25867..27066)
DNA (1200bp) protein (400aa)
Major facilitator superfamily MFS_1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PN08_CHIPD rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU60442.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_398_27
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27149..27991)
DNA (843bp) protein (281aa)
Transcriptional regulator, AraC family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PN09_CHIPD
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACU60443.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCNpilot_cont_500_bf_scaffold_398_28
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28368..29105)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00037A8124 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN72324.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_398_29
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(29517..29957)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BXE1_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERM82234.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source="Rhodonellum psychrophilum GCM71 = DSM 17998.;"
GCN5-related N-acetyltransferase
SCNpilot_cont_500_bf_scaffold_398_30
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30556..36204
DNA (5649bp) protein (1883aa)
CHU large protein; uncharacterized n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X1S8_FLAB3 rbh
hypothetical protein rbh
CHU large protein uncharacterized {ECO:0000313|EMBL:ACU08391.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
Displaying items 1-30 of 90 in total

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