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SCNpilot_cont_500_bf_scaffold_1110

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_cont_500_bf_scaffold_1110_1
Flavobacterium limnosediminis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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3..155
DNA (153bp) protein (51aa)
IS3 family transposase n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SLG8_9FLAO
IS3 family transposase {ECO:0000313|EMBL:ESU25230.1}; TaxID=1341181 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium limnosediminis JC2902.;"
SCNpilot_cont_500_bf_scaffold_1110_2
unknown

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606..755
DNA (150bp) protein (50aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1110_3
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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860..1798
DNA (939bp) protein (313aa)
5'-Nucleotidase domain protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AFZ3_IGNAJ
5'-nucleotidase
5'-Nucleotidase domain protein {ECO:0000313|EMBL:AFH47900.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 /; Mat9-16).;"
SCNpilot_cont_500_bf_scaffold_1110_4
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(2073..4991)
DNA (2919bp) protein (973aa)
Protein-export membrane protein, SecD/SecF family n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CC47_9FLAO rbh
Preprotein translocase subunit SecD {ECO:0000313|EMBL:KIA82538.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
preprotein translocase subunit SecD rbh
SCNpilot_cont_500_bf_scaffold_1110_5
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5147..6505)
DNA (1359bp) protein (453aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22] rbh
Coproporphyrinogen-III oxidase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3V9_FLAB3 rbh
SCNpilot_cont_500_bf_scaffold_1110_6
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6573..7592)
DNA (1020bp) protein (340aa)
Glycosyl hydrolase, BNR repeat-containing protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3S2_FLAB3 rbh
Glycosyl hydrolase {ECO:0000313|EMBL:KIA88887.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
glycosyl hydrolase, BNR repeat-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1110_7
Flavobacteriaceae bacterium 3519-10, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(7673..9349)
DNA (1677bp) protein (559aa)
Amino acid permease n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3S1_FLAB3 rbh
amino acid permease; K03294 basic amino acid/polyamine antiporter, APA family rbh
Amino acid permease {ECO:0000313|EMBL:ACU07059.1}; TaxID=531844 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae.;" source="Flavobacteriaceae bacterium (strain 3519-10).;"
SCNpilot_cont_500_bf_scaffold_1110_8
unknown

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9502..9690
DNA (189bp) protein (63aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1110_9
unknown

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comp(9762..11015)
DNA (1254bp) protein (418aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1110_10
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11369..14080
DNA (2712bp) protein (904aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BXY8_9FLAO rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KFF02565.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
AraC family two component transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1110_11
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14343..14711
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TCD7_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEW01444.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCNpilot_cont_500_bf_scaffold_1110_12
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

14820..15332
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Empedobacter brevis RepID=UPI0003818BD0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABV67646.1}; TaxID=367737 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="Arcobacter butzleri (strain RM4018).;"
SCNpilot_cont_500_bf_scaffold_1110_13
unknown

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15591..15851
DNA (261bp) protein (87aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1110_14
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16216..16857
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CHX0_ELIME
Uncharacterized protein {ECO:0000313|EMBL:KFC22136.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1110_15
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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17702..19015
DNA (1314bp) protein (438aa)
MFS transporter n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI000366F976 rbh
MFS transporter {ECO:0000313|EMBL:KFF02566.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
major facilitator superfamily permease sugar transporter rbh
SCNpilot_cont_500_bf_scaffold_1110_16
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19099..20643
DNA (1545bp) protein (515aa)
glycosyl hydrolase (EC:3.2.1.-); K01212 levanase [EC:3.2.1.65] rbh
hypothetical protein n=1 Tax=Flavobacteriaceae bacterium P7-3-5 RepID=UPI00037C7519 rbh
Glycosyl hydrolase family 32 {ECO:0000313|EMBL:KFF10383.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
SCNpilot_cont_500_bf_scaffold_1110_17
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

20719..23820
DNA (3102bp) protein (1034aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Joostella marina DSM 19592 RepID=I3C1H9_9FLAO rbh
Membrane protein {ECO:0000313|EMBL:KFF10384.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
TonB-dependent receptor rbh
SCNpilot_cont_500_bf_scaffold_1110_18
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23921..25618
DNA (1698bp) protein (566aa)
RagB/SusD family protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C1I0_9FLAO rbh
Glycan metabolism protein RagB {ECO:0000313|EMBL:KFF10385.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
RagB/SusD domain-containing protein rbh
SCNpilot_cont_500_bf_scaffold_1110_19
Chryseobacterium sp. StRB126, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

25630..27024
DNA (1395bp) protein (465aa)
Putative uncharacterized protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCJ4_9SPHI rbh
PKD domain containing protein {ECO:0000313|EMBL:BAP32388.1}; TaxID=878220 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. StRB126.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1110_20
Chryseobacterium soli, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

27036..28574
DNA (1539bp) protein (513aa)
Glycosyl hydrolase family 32 domain protein n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YCJ5_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:KFF10387.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
Glycosyl hydrolase family 32 domain-containing protein
SCNpilot_cont_500_bf_scaffold_1110_21
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28578..29486
DNA (909bp) protein (303aa)
carbohydrate kinase, PfkB family (EC:2.7.1.-); K00847 fructokinase [EC:2.7.1.4] rbh
hypothetical protein n=1 Tax=Flavobacterium rivuli RepID=UPI00036182A3 rbh
Carbohydrate kinase {ECO:0000313|EMBL:KFF02572.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium luteum.;"
SCNpilot_cont_500_bf_scaffold_1110_22
unknown

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comp(29536..29727)
DNA (192bp) protein (64aa)

This feature has no annotations

SCNpilot_cont_500_bf_scaffold_1110_23
Chryseobacterium antarcticum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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29757..30434
DNA (678bp) protein (226aa)
Nicotinamide mononucleotide transporter PnuC n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJ57_9FLAO rbh
Nicotinamide mononucleotide transporter {ECO:0000313|EMBL:KEY20102.1}; TaxID=266748 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium antarcticum.;"
Ribosyl nicotinamide transporter, pnuC-like protein; K03811 nicotinamide mononucleotide transporter rbh
SCNpilot_cont_500_bf_scaffold_1110_24
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30628..31413
DNA (786bp) protein (262aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028063};; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
Diaminopimelate epimerase n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CJC7_9FLAO rbh
hypothetical protein rbh
SCNpilot_cont_500_bf_scaffold_1110_25
Chryseobacterium jeonii, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

31467..32510
DNA (1044bp) protein (348aa)
YceG family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2T3R0_9FLAO rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KIA88877.1}; TaxID=266749 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium jeonii.;"
aminodeoxychorismate lyase; K07082 UPF0755 protein rbh
SCNpilot_cont_500_bf_scaffold_1110_26
Chryseobacterium sp. P1-3, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

32637..35216
DNA (2580bp) protein (860aa)
TonB-dependent receptor, putative n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X3R6_FLAB3 rbh
TonB-dependent receptor {ECO:0000313|EMBL:KFF74940.1}; TaxID=1517683 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. P1-3.;"
TonB-dependent receptor rbh
SCNpilot_cont_500_bf_scaffold_1110_27
Chryseobacterium gleum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(35287..36159)
DNA (873bp) protein (291aa)
Transcriptional regulator, AraC family n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1L8_9FLAO rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFK34229.1}; TaxID=525257 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium gleum ATCC 35910.;"
AraC family transcriptional regulator rbh
SCNpilot_cont_500_bf_scaffold_1110_28
Epilithonimonas sp. FH1, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

36332..36898
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Chryseobacterium gleum ATCC 35910 RepID=D7W1L7_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KFC20455.1}; TaxID=1233951 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas sp. FH1.;"
hypothetical protein
SCNpilot_cont_500_bf_scaffold_1110_29
unknown

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37203..37460
DNA (258bp) protein (86aa)

This feature has no annotations

Displaying 29 items

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